Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29]
776 sequences; 33,668,918 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq609 452 7e-125
seq327 448 9e-124
seq155 396 5e-108
seq472 289 5e-76
seq698 279 1e-72
seq760 217 3e-54
seq319 176 9e-42
seq309 132 9e-29
seq554 96.9 7e-18
seq545 91.5 3e-16
>seq609
Length=1006
Score = 452 bits (500), Expect = 7e-125
Identities = 291/313 (93%), Gaps = 4/313 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||| |||||||||||| ||||| || |||||||||||||||||
Sbjct 385 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 444
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||| || || || ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 445 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 504
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACT-GACAGAGCCAACGAGTTCATCACCTTGGC 197
|||||||||||||||||||||||||||||| |||||||||| |||||| || ||||||||
Sbjct 505 AGATGTTCTGGGCCGCACGCGCGCTACACTCGACAGAGCCAGCGAGTTTATAACCTTGGC 564
Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCT-GGGGATAGAGCATTGCAATTA 256
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 565 CGGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGGATAGAGCATTGCAATTA 624
Query 257 TTGCTCTTCAACGA-GGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315
|||||||||||||| ||||| ||||||||||| | ||||||||| |||||||||||||||
Sbjct 625 TTGCTCTTCAACGAGGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTC 684
Query 316 CCTGCCCTTTGTA 328
|||||||||||||
Sbjct 685 CCTGCCCTTTGTA 697
>seq327
Length=1039
Score = 448 bits (496), Expect = 9e-124
Identities = 282/302 (93%), Gaps = 2/302 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||| |||||||||||| ||||| || |||||||||||||||||
Sbjct 302 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 243
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||| || || || ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 242 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 183
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
|||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||
Sbjct 182 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTATAACCTTGGCC 123
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 122 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 63
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA-TTACGTCCC 317
||||||||||||||||| ||||||||||| | ||||||||| |||||||| |||||||||
Sbjct 62 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGAGTTACGTCCC 3
Query 318 TG 319
||
Sbjct 2 TG 1
>seq155
Length=1069
Score = 396 bits (438), Expect = 5e-108
Identities = 271/297 (91%), Gaps = 7/297 (2%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| || |||||||||||||| |||||||||||| | |||| | |||||||||||||||||
Sbjct 836 GAACGNGACCTTAACCTGCTTAATAGCCAGGCCGGNTTTG-CTGGTCGCCGGCTTCTTAG 778
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||| || || || ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 777 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 718
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
|||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||
Sbjct 717 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTATAACCTTGGCC 658
Query 199 GGAAGGTCT-GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257
||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 657 GGAAGGTCTGGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGAT-GAGCATTGCAATTAT 599
Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACG-CGTTG-ATTAC 312
||||| |||||||||||| ||||||||||| | ||||||||| || ||||| |||||
Sbjct 598 TGCTC-TCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGTCGTTGTATTAC 543
>seq472
Length=1029
Score = 289 bits (320), Expect = 5e-76
Identities = 183/197 (93%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||| |||||||||||| ||||| || |||||||||||||||||
Sbjct 197 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 138
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||| || || || ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 137 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 78
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
|||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||
Sbjct 77 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTATAACCTTGGCC 18
Query 199 GGAAGGTCTGGGTAATC 215
|||||||||||||||||
Sbjct 17 GGAAGGTCTGGGTAATC 1
>seq698
Length=1023
Score = 279 bits (308), Expect = 1e-72
Identities = 172/181 (95%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 149 GGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG-CCGGAAGGTCT 207
|||||||||||||||||||||||||||||| |||||| || ||||||| |||||||||||
Sbjct 1023 GGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTT-ATAACCTTGGTCCGGAAGGTCT 965
Query 208 GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAA 267
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 GGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAA 905
Query 268 CGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327
|||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||
Sbjct 904 CGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGT 845
Query 328 A 328
|
Sbjct 844 A 844
>seq760
Length=1096
Score = 217 bits (240), Expect = 3e-54
Identities = 159/178 (89%), Gaps = 5/178 (3%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGC-TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTA 78
|| |||||||||||||||| | |||||||||||| ||||| || ||||||||||||||||
Sbjct 918 GAACGAGACCTTAACCTGCCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTA 977
Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
|||||||| || || || ||| || ||| ||||||||||||| |||||||||||||||||
Sbjct 978 GAGGGACTGTCTGCGTCTAGCAGACGGA-GTTTGAGGCAATA-CAGGTCTGTGATGCCCT 1035
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA-GCCAACGAGTTCATCACCTT 194
||||||||||||||||||||||||||||||||||||| |||| |||||| || || ||
Sbjct 1036 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGACGCCAGCGAGTTTATAACGTT 1093
>seq319
Length=1122
Score = 176 bits (194), Expect = 9e-42
Identities = 253/335 (76%), Gaps = 44/335 (13%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAAT-AGCCAGGCCCGC----TTTGGCGGGT-CG--CCGG 71
|| ||||||||||||||||| ||| ||||||||| | |||| | ||| || ||||
Sbjct 788 GAACGAGACCTTAACCTGCTTAATTAGCCAGGCCGGGCCTTTTTGTCTGGTTCGGCCCGG 847
Query 72 CTTCTT-AGAGGGA------CTATCGGCTCAAGCCGATGGAAGTTTGAG---GC-AATAA 120
|||||| |||||| || ||| ||| || ||||| || || || |||||
Sbjct 848 CTTCTTTAGAGGGGACGTGTCTTGCGGTCTTAGCAGACGGAAGGTTTAGTAGGCGAATAA 907
Query 121 CA-GGTC-TGT-GATGCCCTTAG--ATGTT-CTGGGCCG-CACGCGCGCTACACTGACAG 173
|| |||| ||| |||||||||| ||||| || ||||| ||||||||||||||||||||
Sbjct 908 CAAGGTCGTGTTGATGCCCTTACGTATGTTTCTTGGCCGGCACGCGCGCTACACTGACAG 967
Query 174 AGCCAACGAG-----TTCATCACCTT----GGCCGGAA---GGTCTGGGTAA-TCTTGTT 220
|| | ||| | || | ||||| | |||| | |||| ||||| ||||||
Sbjct 968 AGGCCACGCGGAGGTTTATTAACCTTTACGGTCCGGGAACGGGTCGTGGTAAGTCTTGTG 1027
Query 221 AAACTCTGTCGTGCTGGGGA-TAGAGCATTG-CAATTA--TTG-CTCTTCAACGAGGAAT 275
|| ||||||||||||||| |||||||||| |||||| ||| |||||| |||||||||
Sbjct 1028 AACTACTGTCGTGCTGGGGAGTAGAGCATTGTCAATTAATTTGTCTCTTCTACGAGGAAT 1087
Query 276 GCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||||||| | ||||||||| ||||||||||
Sbjct 1088 TCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATT 1122
>seq309
Length=1077
Score = 132 bits (146), Expect = 9e-29
Identities = 86/93 (92%), Gaps = 1/93 (1%)
Strand=Plus/Minus
Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296
||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||
Sbjct 97 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATC 38
Query 297 AGCACGCGTTGATTACGTCCCTG-CCCTTTGTA 328
||| ||||||||||||||||||| |||||||
Sbjct 37 AGCTCGCGTTGATTACGTCCCTGATACTTTGTA 5
>seq554
Length=1014
Score = 96.9 bits (106), Expect = 7e-18
Identities = 63/68 (93%), Gaps = 1/68 (1%)
Strand=Plus/Plus
Query 262 CTTCAACGAGGAATGCCTA-GTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320
|||||||||||||| |||| ||||||| | ||||||||| ||||||||||||||||||||
Sbjct 3 CTTCAACGAGGAATTCCTACGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCTGC 62
Query 321 CCTTTGTA 328
||||||||
Sbjct 63 CCTTTGTA 70
>seq545
Length=1095
Score = 91.5 bits (100), Expect = 3e-16
Identities = 58/63 (92%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||| |||||||||||| ||||| || |||||||||||||||||
Sbjct 1033 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 1092
Query 80 AGG 82
|||
Sbjct 1093 AGG 1095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947192649728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |