Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq609 452 7e-125 seq327 448 9e-124 seq155 396 5e-108 seq472 289 5e-76 seq698 279 1e-72 seq760 217 3e-54 seq319 176 9e-42 seq309 132 9e-29 seq554 96.9 7e-18 seq545 91.5 3e-16 >seq609 Length=1006 Score = 452 bits (500), Expect = 7e-125 Identities = 291/313 (93%), Gaps = 4/313 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 385 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 444 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 445 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 504 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACT-GACAGAGCCAACGAGTTCATCACCTTGGC 197 |||||||||||||||||||||||||||||| |||||||||| |||||| || |||||||| Sbjct 505 AGATGTTCTGGGCCGCACGCGCGCTACACTCGACAGAGCCAGCGAGTTTATAACCTTGGC 564 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCT-GGGGATAGAGCATTGCAATTA 256 |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 565 CGGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGGATAGAGCATTGCAATTA 624 Query 257 TTGCTCTTCAACGA-GGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 |||||||||||||| ||||| ||||||||||| | ||||||||| ||||||||||||||| Sbjct 625 TTGCTCTTCAACGAGGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTC 684 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 685 CCTGCCCTTTGTA 697 >seq327 Length=1039 Score = 448 bits (496), Expect = 9e-124 Identities = 282/302 (93%), Gaps = 2/302 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 302 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 243 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 242 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 183 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| Sbjct 182 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTATAACCTTGGCC 123 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 122 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 63 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA-TTACGTCCC 317 ||||||||||||||||| ||||||||||| | ||||||||| |||||||| ||||||||| Sbjct 62 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGAGTTACGTCCC 3 Query 318 TG 319 || Sbjct 2 TG 1 >seq155 Length=1069 Score = 396 bits (438), Expect = 5e-108 Identities = 271/297 (91%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || || |||||||||||||| |||||||||||| | |||| | ||||||||||||||||| Sbjct 836 GAACGNGACCTTAACCTGCTTAATAGCCAGGCCGGNTTTG-CTGGTCGCCGGCTTCTTAG 778 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 777 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 718 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| Sbjct 717 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTATAACCTTGGCC 658 Query 199 GGAAGGTCT-GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 ||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct 657 GGAAGGTCTGGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGAT-GAGCATTGCAATTAT 599 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACG-CGTTG-ATTAC 312 ||||| |||||||||||| ||||||||||| | ||||||||| || ||||| ||||| Sbjct 598 TGCTC-TCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGTCGTTGTATTAC 543 >seq472 Length=1029 Score = 289 bits (320), Expect = 5e-76 Identities = 183/197 (93%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 197 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 138 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 137 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 78 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| Sbjct 77 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTATAACCTTGGCC 18 Query 199 GGAAGGTCTGGGTAATC 215 ||||||||||||||||| Sbjct 17 GGAAGGTCTGGGTAATC 1 >seq698 Length=1023 Score = 279 bits (308), Expect = 1e-72 Identities = 172/181 (95%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 149 GGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG-CCGGAAGGTCT 207 |||||||||||||||||||||||||||||| |||||| || ||||||| ||||||||||| Sbjct 1023 GGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTT-ATAACCTTGGTCCGGAAGGTCT 965 Query 208 GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAA 267 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 964 GGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAA 905 Query 268 CGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 |||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct 904 CGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGT 845 Query 328 A 328 | Sbjct 844 A 844 >seq760 Length=1096 Score = 217 bits (240), Expect = 3e-54 Identities = 159/178 (89%), Gaps = 5/178 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGC-TAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTA 78 || |||||||||||||||| | |||||||||||| ||||| || |||||||||||||||| Sbjct 918 GAACGAGACCTTAACCTGCCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTA 977 Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 |||||||| || || || ||| || ||| ||||||||||||| ||||||||||||||||| Sbjct 978 GAGGGACTGTCTGCGTCTAGCAGACGGA-GTTTGAGGCAATA-CAGGTCTGTGATGCCCT 1035 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA-GCCAACGAGTTCATCACCTT 194 ||||||||||||||||||||||||||||||||||||| |||| |||||| || || || Sbjct 1036 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGACGCCAGCGAGTTTATAACGTT 1093 >seq319 Length=1122 Score = 176 bits (194), Expect = 9e-42 Identities = 253/335 (76%), Gaps = 44/335 (13%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAAT-AGCCAGGCCCGC----TTTGGCGGGT-CG--CCGG 71 || ||||||||||||||||| ||| ||||||||| | |||| | ||| || |||| Sbjct 788 GAACGAGACCTTAACCTGCTTAATTAGCCAGGCCGGGCCTTTTTGTCTGGTTCGGCCCGG 847 Query 72 CTTCTT-AGAGGGA------CTATCGGCTCAAGCCGATGGAAGTTTGAG---GC-AATAA 120 |||||| |||||| || ||| ||| || ||||| || || || ||||| Sbjct 848 CTTCTTTAGAGGGGACGTGTCTTGCGGTCTTAGCAGACGGAAGGTTTAGTAGGCGAATAA 907 Query 121 CA-GGTC-TGT-GATGCCCTTAG--ATGTT-CTGGGCCG-CACGCGCGCTACACTGACAG 173 || |||| ||| |||||||||| ||||| || ||||| |||||||||||||||||||| Sbjct 908 CAAGGTCGTGTTGATGCCCTTACGTATGTTTCTTGGCCGGCACGCGCGCTACACTGACAG 967 Query 174 AGCCAACGAG-----TTCATCACCTT----GGCCGGAA---GGTCTGGGTAA-TCTTGTT 220 || | ||| | || | ||||| | |||| | |||| ||||| |||||| Sbjct 968 AGGCCACGCGGAGGTTTATTAACCTTTACGGTCCGGGAACGGGTCGTGGTAAGTCTTGTG 1027 Query 221 AAACTCTGTCGTGCTGGGGA-TAGAGCATTG-CAATTA--TTG-CTCTTCAACGAGGAAT 275 || ||||||||||||||| |||||||||| |||||| ||| |||||| ||||||||| Sbjct 1028 AACTACTGTCGTGCTGGGGAGTAGAGCATTGTCAATTAATTTGTCTCTTCTACGAGGAAT 1087 Query 276 GCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||| | ||||||||| |||||||||| Sbjct 1088 TCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATT 1122 >seq309 Length=1077 Score = 132 bits (146), Expect = 9e-29 Identities = 86/93 (92%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296 ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| Sbjct 97 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATC 38 Query 297 AGCACGCGTTGATTACGTCCCTG-CCCTTTGTA 328 ||| ||||||||||||||||||| ||||||| Sbjct 37 AGCTCGCGTTGATTACGTCCCTGATACTTTGTA 5 >seq554 Length=1014 Score = 96.9 bits (106), Expect = 7e-18 Identities = 63/68 (93%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 262 CTTCAACGAGGAATGCCTA-GTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320 |||||||||||||| |||| ||||||| | ||||||||| |||||||||||||||||||| Sbjct 3 CTTCAACGAGGAATTCCTACGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCTGC 62 Query 321 CCTTTGTA 328 |||||||| Sbjct 63 CCTTTGTA 70 >seq545 Length=1095 Score = 91.5 bits (100), Expect = 3e-16 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 1033 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 1092 Query 80 AGG 82 ||| Sbjct 1093 AGG 1095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947192649728