Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq274 105 3e-17 >seq274 Length=162771 Score = 105 bits (116), Expect = 3e-17 Identities = 113/147 (77%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || ||||||||||||||||||| | | ||||||||||||||||| ||| ||||| Sbjct 148719 CCGATTGTCATACGAGAGGGAATGGCGTGGGGGTTGATGATGATGTCGGGCGTGATGCCC 148778 Query 364484 TCAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || || || ||||| | || | || || | | ||| ||| ||||| ||||| || | Sbjct 148779 TCCGCCGTGAACGGCATGTCCTCCTGGCGGTA-GGTGATACCGATGGTACCCTTCTGACC 148837 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || ||||| ||||||||||| || Sbjct 148838 GTGACGCGAAGCGAACTTGTCGCCGAT 148864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884867659516968