Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26]
9,648 sequences; 31,621,284 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq2267 390 2e-106
>seq2267
Length=3551
Score = 390 bits (432), Expect = 2e-106
Identities = 278/315 (88%), Gaps = 3/315 (1%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGG 63
|| || || |||| ||||||||||||||| || || ||| ||| |||| ||| | ||||
Sbjct 3072 TGCTCTGGTCGGGTCTTTCCTTCTGGGGAGCCAGCGTGCTCTTAACTGAGTGCGTTGGGG 3131
Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123
| ||||||||||||||||||||||||||||||||| ||||||||| | ||| |||||||
Sbjct 3132 ATCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCTTACGCTTGAATACA 3191
Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183
||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |
Sbjct 3192 TTAGCATGGAATAATAGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCGAAG 3250
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||||||||| ||||| | |||||| |||||||||||||||||||||||
Sbjct 3251 TAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTTG 3310
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
||||||| |||||||||| |||||||||| || |||||||||||||||||||||| |
Sbjct 3311 GATTTATGAAAGACTAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AG 3369
Query 304 AACGAAAGTTAGGGG 318
|||||||||||||||
Sbjct 3370 AACGAAAGTTAGGGG 3384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915111701504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |