Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2267 390 2e-106 >seq2267 Length=3551 Score = 390 bits (432), Expect = 2e-106 Identities = 278/315 (88%), Gaps = 3/315 (1%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGG 63 || || || |||| ||||||||||||||| || || ||| ||| |||| ||| | |||| Sbjct 3072 TGCTCTGGTCGGGTCTTTCCTTCTGGGGAGCCAGCGTGCTCTTAACTGAGTGCGTTGGGG 3131 Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123 | ||||||||||||||||||||||||||||||||| ||||||||| | ||| ||||||| Sbjct 3132 ATCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCTTACGCTTGAATACA 3191 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| | Sbjct 3192 TTAGCATGGAATAATAGAATAGGACTTT-GGTTCTATTTTGTTGGTTTCTAGGACCGAAG 3250 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||||| Sbjct 3251 TAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTTG 3310 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||||||| |||||||||| |||||||||| || |||||||||||||||||||||| | Sbjct 3311 GATTTATGAAAGACTAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AG 3369 Query 304 AACGAAAGTTAGGGG 318 ||||||||||||||| Sbjct 3370 AACGAAAGTTAGGGG 3384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915111701504