Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26]
9,648 sequences; 31,621,284 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq2268 361 2e-97
>seq2268
Length=2405
Score = 361 bits (400), Expect = 2e-97
Identities = 264/305 (87%), Gaps = 5/305 (2%)
Strand=Plus/Plus
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
||||||| || || ||||||| ||| || ||||||||| |||||||||||||||||||||
Sbjct 1780 TAGGATGTTGACGAAATGGTTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 1839
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
||| | ||||||||||||||| ||||||| | |||| ||||||||||||| ||||| |
Sbjct 1840 CATACACGCGAGTGTTTGGGTGGCAAACCCTTACGCGAAATGAAAGTGAACTTAGGTGCG 1899
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
| | |||||| ||||||||| || ||| | || | || ||| |||||||||||
Sbjct 1900 ATCTTC----GGTGCAGCATCGACCGGTCTGGATTTTTTTG-ATAGATCTGAGTAAGAGC 1954
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1955 GTGTCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 2014
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
|||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 2015 CTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 2074
Query 679 GGCGA 683
|||||
Sbjct 2075 GGCGA 2079
Score = 250 bits (276), Expect = 1e-63
Identities = 240/303 (79%), Gaps = 6/303 (2%)
Strand=Plus/Plus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||| | |||||| |||||||||||||||| | ||||||| ||||||| | |||||||
Sbjct 1344 TTCTAAGAGTCGGTTTGTTTGGGAATGCAGACCAAAATGGGTGGTAAATACCATCTAAAG 1403
Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
|||||||||||| |||||||||||||| |||||| |||| |||||||||||||||||
Sbjct 1404 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTCCCGTGAGGGAAAGATGAAAAGCACT 1463
Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213
||| |||||||||| ||||| |||||||||||| |||||||| |||||| |||||| |
Sbjct 1464 TTGAAAAGAGAGTT-AAAAGTACGTGAAATTGTCAAAAGGGAAACGCTTGAAACCAGTAT 1522
Query 214 TGCCCGCAGTTGCTCAACCGGCC--CCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGC 271
||| |||| | |||| || || | | || ||||||||| ||| | | || || |
Sbjct 1523 TGCTTGCAGGTAATCAATCGTCCCTCTTGGGGCGGTGCACTTGCCTGTCGGCGGGTCAAC 1582
Query 272 ATCAGCTCGGGCGGTCGGAT-AAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTAT 330
||||| | || | |||| ||| ||| | ||| |||||||| ||||||||||||||
Sbjct 1583 ATCAGTTTGGTTCG--GGATAAAAAGCCAGGAGAAGGTGGCCCCTCTCGGGGGGTGTTAT 1640
Query 331 AGC 333
|||
Sbjct 1641 AGC 1643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079793050400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |