Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2267 154 2e-35 >seq2267 Length=3551 Score = 154 bits (170), Expect = 2e-35 Identities = 126/149 (85%), Gaps = 3/149 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| || | |||||||||||||||||||||||||||||||| Sbjct 3242 CTAGAAACCAACAAAATAGA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATTCA 3184 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||||||||||||||| |||||||||||||| |||| ||||||||||||| ||| | | Sbjct 3183 AGCGTAAGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGATCCCCAACG 3124 Query 126 CAC-CAATGAAG-GCATACGGGCTCACCA 152 ||| || | ||| ||| | ||||| ||| Sbjct 3123 CACTCAGTTAAGAGCACGCTGGCTCCCCA 3095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595144369632