Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2268 325 7e-87 >seq2268 Length=2405 Score = 325 bits (360), Expect = 7e-87 Identities = 229/259 (88%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||||| | | | || || ||||||||||||||||||||||||||||| Sbjct 33 CTTCTTAGAGGGACTATGGATGTTTAATCC-ATGGAAGTTTGAGGCAATAACAGGTCTGT 91 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||||||||||||||||||||||||||||||||||||| || || | ||| || Sbjct 92 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGGCAGCAAGTAATTC 151 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 |||||||||||||||||||||||||||| | ||||| ||||||||||||||| | || Sbjct 152 ACCTTGGCCGGAAGGTCTGGGTAATCTTCTGAAACTTCATCGTGCTGGGGATAGTCCTTT 211 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||||||| |||||||||||||| ||||||||||| | ||||||||| ||||||||| Sbjct 212 GCAATTATTGGACTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGAT 271 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 272 TACGTCCCTGCCCTTTGTA 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947108614144