Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26]
9,648 sequences; 31,621,284 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq2272 288 3e-75
seq2271 118 3e-24
>seq2272
Length=1750
Score = 288 bits (318), Expect = 3e-75
Identities = 209/240 (87%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1054 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATC 995
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 994 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 935
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAAT-GGTCGGTGAAGACCAGTTCCGCTTCATTG 185
||||| ||||||||| | |||| || | || | || || |||| ||||| ||||||
Sbjct 934 AGCCCGTAAAGGACCTTGAAGCCAAAAGGTGGGACTGTTAATCCCAGCTCCGCCTCATTG 875
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| |||||||||| ||||||| |||||||||||||||| |||||||| ||||||||||
Sbjct 874 AATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTT 818
>seq2271
Length=619
Score = 118 bits (130), Expect = 3e-24
Identities = 72/76 (95%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 468 CGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 527
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 568 CGCGCTTGGT---ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 512
Query 528 TCAACATCACTTTCTG 543
|||||| |||||||||
Sbjct 511 TCAACACCACTTTCTG 496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635042235904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |