Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2267 715 0.0 >seq2267 Length=3551 Score = 715 bits (792), Expect = 0.0 Identities = 467/508 (92%), Gaps = 6/508 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| | || ||||||||||| |||||||||||||||||| Sbjct 2914 GTACTCATTCCAATTACAAGACTCTAA-GAGCCCTGTATTGTTATTTATTGTCACTACCT 2856 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2855 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2796 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 2795 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 2736 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 2735 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGTCGACA 2676 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAG--GGCGTTG 298 ||||| ||| ||||||| ||||||| |||||||||||| | || | | | |||| Sbjct 2675 CAAGGTCATACGATTCGAAAAGTTATCATGAATCACCAA-AAAACCGGTTGCCCGGGTTG 2617 Query 299 GTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357 ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| Sbjct 2616 GTTTTTTATCTAATAAATACATCCCTTCCAGAAGTCGGGATTTTTAGCATGTATTAGCTC 2557 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 ||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| Sbjct 2556 TAGAATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACTATAACCGATTTAA 2497 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATC 476 |||||||||||||||||||| ||| | | ||| ||||||||||||||||||||||||||| Sbjct 2496 TGAGCCATTCGCAGTTTCACAGTACAAACTTGTTTATACTTAGACATGCATGGCTTAATC 2437 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 2436 TTTGAGACAAGCATATGACTACTGGCAG 2409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510254276608