Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq8570 105 3e-17 >seq8570 Length=955 Score = 105 bits (116), Expect = 3e-17 Identities = 113/147 (77%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || ||||||||||||||||||| | | ||||||||||||||||| ||| ||||| Sbjct 500 CCGATTGTCATACGAGAGGGAATGGCGTGGGGGTTGATGATGATGTCGGGCGTGATGCCC 559 Query 364484 TCAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || || || ||||| | || | || || | | ||| ||| ||||| ||||| || | Sbjct 560 TCCGCCGTGAACGGCATGTCCTCCTGGCGGTA-GGTGATACCGATGGTACCCTTCTGACC 618 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || ||||| ||||||||||| || Sbjct 619 GTGACGCGAAGCGAACTTGTCGCCGAT 645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884653399767664