Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq6 118 6e-25 >seq6 Length=3889359 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3285697 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3285752 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3285753 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3285802 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3295547 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3295602 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3295603 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3295652 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3305397 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3305452 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3305453 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3305502 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3325247 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3325302 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3325303 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3325352 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3335097 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3335152 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3335153 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3335202 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3353118 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3353173 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3353174 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3353223 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3372968 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3373023 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3373024 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3373073 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3383846 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3383901 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3383902 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3383951 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3394724 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3394779 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3394780 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3394829 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3412332 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3412387 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3412388 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3412437 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3422182 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3422237 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3422238 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3422287 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3442032 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3442087 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3442088 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3442137 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 3451882 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3451937 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3451938 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3451987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799963340