Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6 242 3e-59 seq8 87.8 1e-12 >seq6 Length=3889359 Score = 242 bits (268), Expect = 3e-59 Identities = 384/545 (70%), Gaps = 9/545 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||| | ||||| | || || Sbjct 952792 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCTGAGGAAATGGACCTG 952733 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| || || |||||||| | || | | || ||||| || ||||| Sbjct 952732 TCCAAGGATCTGCATGACTGGAACAACCGCCTCAACAACGATGAACGCCACTTCATCTCG 952673 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || || |||||||||| ||||| || |||||||||||||| ||||| | | || ||| Sbjct 952672 CACGTTCTGGCGTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTGGTAGAGCGT 952613 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| | | ||||| || | | | |||||||| || ||||||||||||||||| ||| Sbjct 952612 TTCTCCAACGAGGTCCAGGCGGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATG 952553 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| | ||||| |||| |||| | |||||||| ||||| |||| ||| | || Sbjct 952552 GAGAACATTCACTCTGAGACGTACTCGCTCCTCATCGACACGTATATCAAGGACCCCGCA 952493 Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443 | || || | | ||| ||||||||||||| || || | ||| ||| || ||| Sbjct 952492 CAGCGCGAGCACCTCTTCGATGCCATCGAGACTATCCCCTGCATTAAGAAGAAGGCTGAT 952433 Query 61444 TGGGC-CTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCA 61500 ||||| |||| |||||| | | |||| | | | || | |||||| | | || Sbjct 952432 TGGGCTCTTC-GCTGGATCTC--GGACAAGGAGTCAGCCTTCGCTGAACGCCTTGTAGCC 952376 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | ||||||||| | |||||| ||| || || ||| | ||||| ||| | ||| Sbjct 952375 TTCGCTGCCGTCGAGGGTATCTTTTTCTCTGGCTCTTTCGCCTCCATCTTCTGGCTCAAG 952316 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || || || | ||||| || || |||||| || ||| | || || ||||| |||||| Sbjct 952315 AAGCGCGGCTTGATGCCTGGCCTCACCTTCTCTAACGAGCTCATCTCCCGCGATGAGGGC 952256 Query 61621 ATGCA 61625 ||||| Sbjct 952255 ATGCA 952251 Score = 159 bits (176), Expect = 3e-34 Identities = 368/547 (67%), Gaps = 13/547 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| | || |||| ||||||||||| || || ||| |||| | Sbjct 954258 ATATGGCAGATGTACAAGGACGCCCAAGCATCCTTCTGGACCGTCGAAGAGATCGACCTC 954317 Query 61147 TCCAAAGACATGAATGACTGG--GAGC--GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||| | ||| | | |||||| || | | | | | | || || || ||| | Sbjct 954318 TCCTACGACCTCATGGACTGGACGACCAAGCTCACCCC-CAACGAGCAGCACTTCGTCTC 954376 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 | || | || ||||| ||||| |||||||| |||||||| ||||| | | || || Sbjct 954377 CTACGTCCTCGCCTTCTTCGCCGCCTCGGACGGGATCGTCAACGAGAACCTCGTCGAGCG 954436 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | | || ||||| | | |||||||| || ||||||||||||||||| || Sbjct 954437 GTTCTCCAACGAAGTGCAGGCCGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 954496 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||||| || |||||||||| |||| | |||||||| |||||| || | || | || Sbjct 954497 CGAGAACGTGCACTCGGAGACGTACTCGCTCCTCATCGACACGTACGTCCGCGACCCCGC 954556 Query 61383 GGAACGTGAACGAT--TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440 | | || | || | ||||| | || ||| | || || || || ||| || || Sbjct 954557 GCAGCGCG--CGTTCCTGTTCGACGCGATCAACACCATCCCCTGCGTCGCGCGCAAGGCC 954614 Query 61441 GATTGGGCCTTCAATTGGATCACCAGTACAACGGCTAC--ATTTGGTGAACGATTGCTGG 61498 || |||||| | |||||| || || ||| | || | || || | | | Sbjct 954615 GACTGGGCCCTGCGCTGGATCGCC--GACTCGCGCTCCGTCTTCGCAGAGCGCCTCGTCG 954672 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | || || | |||||||| || || ||| || || || ||||| ||||| ||| | | Sbjct 954673 CGTTCGCCGCCGTCGAGGGCGTCTTCTTCTCCGGGTCCTTCGCCGCGATCTTCTGGCTCA 954732 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||| || || | ||||| ||||| || ||| ||| ||| | || || ||||| |||| Sbjct 954733 AGAAGCGCGGCTTGATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCCCGCGATGAGG 954792 Query 61619 GCATGCA 61625 ||||||| Sbjct 954793 GCATGCA 954799 >seq8 Length=3112363 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 65710 ACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACG 65769 |||||||| ||||| || ||| || || |||||||| || | || |||| || Sbjct 1725008 ACAGCTGGCCTCGACCGCTGCATGGTAGATCGTCTCGAAGATCTGCAAGTTGAGTTTGCG 1724949 Query 65770 TGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAAC 65829 |||||| | ||| | ||||| | | | | || | ||||| ||||| ||||| Sbjct 1724948 AGCCTCAACCGAGTCGAAGGGCATGCGAAGCGCCATGAACGCATCGGCAAGACCCTGAAC 1724889 Query 65830 TCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTA 65889 || | |||||||||||||||||||| ||||| || |||||||| | ||| ||||| Sbjct 1724888 ACCGACACCGATGGGACGATGACGCATGTTGGAGCGGTGAGCCTCAGGAATAGGATAGTA 1724829 Query 65890 ATTGATATCGATAATGCGATT 65910 |||| || || || || || Sbjct 1724828 GTTGACGTCAATGATACGGTT 1724808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567937010320