Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2186 830 0.0 seq256 517 5e-144 seq1334 277 7e-72 seq595 170 8e-40 seq3254 165 3e-38 seq1423 129 2e-27 >seq2186 Length=1079 Score = 830 bits (920), Expect = 0.0 Identities = 582/657 (89%), Gaps = 6/657 (1%) Strand=Plus/Minus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 655 CCGTGTAAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTA 596 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 595 AATTTCATCTAAAGCTAAATACTGGCCGGAGACCGATAGCGCACAAGTAGAGTGATCGAA 536 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 535 AGATGAAAAGCACTTTGAAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAGCG 476 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCG-GCCGGTGCACTCTTCTG 258 ||||| |||||||| |||||| | | ||| |||| | ||| ||||||| ||| | | Sbjct 475 CTTGCGACCAGACTCGCCCGC-GGGGTTCAGCCGG-CATTCGTGCCGGTGTACTTCCCCG 418 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 || | ||||||| || | | |||||| ||| ||||||||| ||||||| | |||| | Sbjct 417 TGGGCGGGCCAGCGTCGGTTTGGGCGGCCGGTCAAAGGCCCCTGGAATGTAGTGCCCTCC 358 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| |||||||| |||||| ||||||||| |||||||| |||| |||||| |||| Sbjct 357 GGGGCACCTTATAGCCAGGGGTGCAATGCGGCCAGCCTGGACCGAGGAACGCGCTTCGGC 298 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||| |||||| ||||||| |||| || ||||||||| ||||||||||||||||||||| Sbjct 297 ACGGACGCTGGCATAATGGTCGTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 238 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 |||||| ||||||||| |||||||||||||||||||| | |||||| ||||||||||||| Sbjct 237 CATCTACGCGAGTGTTCGGGTGTCAAACCCGTGCGCGCAGTGAAAGCGAACGGAGGTGGG 178 Query 499 A--ACCCGTG-AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 555 | ||| || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 177 AGCCCCCTTGCGGGGCGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAG 118 Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 ||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 117 AGCGTAGCTGTGGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGG 58 Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||| Sbjct 57 AAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGG 1 >seq256 Length=8149 Score = 517 bits (572), Expect = 5e-144 Identities = 528/682 (77%), Gaps = 49/682 (7%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||| ||||||| ||| |||| | ||||||||||||| Sbjct 8144 GAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAATTCCATCTAAAGCTAAAT 8085 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 8084 ATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAA 8025 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 ||||||||||| || ||||||||||| |||||||||| |||||| | ||| | | | Sbjct 8024 AGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTCAGTCGCGTCGT 7965 Query 220 CAGTTGCTCAACCGGCCCCTCGGCC-GGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCT 278 | | |||| || | ||||| |||||||| | | | | | |||||||||| | Sbjct 7964 CCGGAACTCAGCCTTGCT-TCGGCTTGGTGCACTTTCCGGATGACGGGCCAGCATCGATT 7906 Query 279 CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCC---- 334 | | | |||| || || | |||||||| || |||||| | |||||||| | Sbjct 7905 TTGACCGCCGGAAAAGGGTAGGAGAAATGTGGCACC-TTCGGGTG-TGTTATAGTCTCCT 7848 Query 335 --------CGG-GGT---------GGAATGCGGCCCGCCTG--GACTGAGGTCCGCGCTC 374 ||| ||| |||| || || ||||| | ||| ||| ||| | | Sbjct 7847 ATCGCATACGGCGGTTGGGATCGAGGAACGCAGCGCGCCTTATGGCTGGGGTTCGCCCAC 7788 Query 375 -----CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429 || |||||||||||| |||||| | ||| || ||||||||| |||||||||||| Sbjct 7787 ATTCGCGCTTAGGATGCTGGCATAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAA 7728 Query 430 GGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAAC 489 |||||||||||| |||||||||||||||| ||||||| |||||||||||||||||| Sbjct 7727 GGAGTCTAACATACCTGCGAGTGTTTGGGTGGAAAACCCGAGCGCGTAATGAAAGTGAA- 7669 Query 490 GGAGGTGGGAACCC----GTG-AGGGTGCACCATCGA---CCGATCCTGATGTCTTCGGA 541 || || || | | ||| |||| |||||| ||| ||||| || || || Sbjct 7668 --AGTTGAGACCTCTGTCGTGGAGGG-----CATCGATGCCCGGACCTGACGTTCTCTGA 7616 Query 542 TGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAG 601 |||| | | ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 7615 CGGATCCGCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAG 7556 Query 602 GGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCG 661 ||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||| Sbjct 7555 GGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCG 7496 Query 662 TCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||| Sbjct 7495 TCAAATTTGGGTATAGGGGCGA 7474 >seq1334 Length=272 Score = 277 bits (306), Expect = 7e-72 Identities = 229/275 (83%), Gaps = 6/275 (2%) Strand=Plus/Minus Query 388 GGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGC 447 ||| |||||| | ||| || ||||||||| |||||||||||||||||||||||| ||| Sbjct 272 GGCATAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATACCTGC 213 Query 448 GAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCC-GT- 505 ||||||||||||| ||||||| |||||||||||||||||| || || || | | || Sbjct 212 GAGTGTTTGGGTGGAAAACCCGAGCGCGTAATGAAAGTGAA---AGTTGAGACCTCTGTC 156 Query 506 GAGG-GTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 | || | ||| | || ||| ||||| || || || |||| | | ||||||| | Sbjct 155 GTGGAGGGCATCGACGCCCGGACCTGACGTTCTCTGACGGATCCGCGGTAGAGCATGTAT 96 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 95 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 36 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 |||||||||| |||| ||||| ||||||||||||| Sbjct 35 TGGAGGCTCGTAGCGATTCTGACGTGCAAATCGAT 1 >seq595 Length=1461 Score = 170 bits (188), Expect = 8e-40 Identities = 118/134 (88%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | ||| | ||||||||||||||||||||||||||| ||||||| ||| ||| Sbjct 1328 TGTGATGCGCTTTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAAT 1387 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 1388 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 1447 Query 143 TGAAAAGCACTTTG 156 |||||||||||||| Sbjct 1448 TGAAAAGCACTTTG 1461 >seq3254 Length=1458 Score = 165 bits (182), Expect = 3e-38 Identities = 117/134 (87%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | || | ||||||||||||||||||||||||||| ||||||| ||| ||| Sbjct 134 TGTGATGCGCTCTCAAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAAT 75 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 74 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 15 Query 143 TGAAAAGCACTTTG 156 |||||||||||||| Sbjct 14 TGAAAAGCACTTTG 1 >seq1423 Length=459 Score = 129 bits (142), Expect = 2e-27 Identities = 76/79 (96%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 |||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||| Sbjct 459 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCA 400 Query 665 AATTTGGGTATAGGGGCGA 683 ||||||||||||||||||| Sbjct 399 AATTTGGGTATAGGGGCGA 381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079885864550