Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1311 273 4e-71 seq256 161 2e-37 >seq1311 Length=2892 Score = 273 bits (302), Expect = 4e-71 Identities = 235/282 (83%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| Sbjct 151 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 208 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 209 GCCGCGACGCTACCATCTGCCGGATAATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 268 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 ||||| || ||| | || |||| ||||||| |||||||||||||| || |||| | Sbjct 269 GAACGCGGCGATGTTGCCCCGCACGTCGTAGTTGGATACGAATAGGCCTCCGGGCCATGC 328 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG-GAAG-CGCGGGGCGCTCAGCTGGCGGAT 236 |||| ||||||| ||| || ||| | | | |||| | | ||| ||| ||||||| || Sbjct 329 ACCTCAGCAGGCTGGCGAC-GGCTCCTAGGGAGAAGCCCCTGGGAGCT-GGCTGGCGAAT 386 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| ||||| |||| ||||| |||||| |||||||||| Sbjct 387 TGCAATGTCACCTCGCGCGGGGATGAATCCTCTGCAGACGAC 428 >seq256 Length=8149 Score = 161 bits (178), Expect = 2e-37 Identities = 215/284 (76%), Gaps = 11/284 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 4972 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 4915 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 4914 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 4855 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC-CCCG 177 ||| | |||| | ||| |||||| ||| | | ||||| |||||||| | | Sbjct 4854 GAA-ACGATGATGTTGGTCCCGCACATACGAGTTGTGTTGAAATAGAGCTTCGGCTCGTG 4796 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGC-GGGGCGCTCAGCTGGCGGA 235 |||| | ||||| || || || || |||||| || || || | | | ||| | Sbjct 4795 AACCAAATCAGGCAAGC-TGGGCCGGCCGAGCGGAAATGCTTGGTCGGTTTGTTTGCGAA 4737 Query 236 TTGCAATT-TCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| ||| ||| || ||| | ||||||||||||||||| Sbjct 4736 TTGCAATTATCA-TATGGGCGGGGGTGAATCCTTTGCAGACGAC 4694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819157772544