Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3662 255 5e-63 seq4755 167 2e-36 >seq3662 Length=107388 Score = 255 bits (282), Expect = 5e-63 Identities = 389/546 (71%), Gaps = 11/546 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || || ||||||||||||| |||||| | || || Sbjct 77600 ATTTGGCAGATGTACAAGAAGGCTGAGGCGTCCTTCTGGACGGCTGAGGAGATGGACCTG 77659 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | |||||| | || | | ||| || |||| || ||||| Sbjct 77660 TCCAAGGACCTCCACGACTGGAACAACCGCCTGAACGA-CGACGAACGTCACTTCATCTC 77718 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | ||||||||||| || || || ||||||||||| ||||| | | || || Sbjct 77719 GCACGTTCTCGCGTTCTTTGCTGCGTCCGATGGTATCGTCAACGAGAACCTCGTCGAGCG 77778 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || | | | ||||| ||||| ||||||||||||||||| || Sbjct 77779 GTTCTCGAATGAGGTCCAGGCGGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGAT 77838 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| || |||||||||| || ||||||| ||| | Sbjct 77839 GGAGAACATCCACTCCGAGACTTATTCCCTTCTCATCGACACATACATCAAGGATCCTCG 77898 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | || || | | ||| | |||||||| || || || | ||| ||| ||||| Sbjct 77899 CCAGCGCGAGCACCTCTTCGACGCCATCGATACCATTCCCTGTATCAAGAAGAAGGCGGA 77958 Query 61443 TTGGGC-CTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGC 61499 ||||| |||| | |||||| || |||| | || | |||| ||| || | | || Sbjct 77959 CTGGGCTCTTC-ACTGGATCTCC--GACAAGGAGTCTGCGTTTGCTGAGCGTCTCGTTGC 78015 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 || || | ||||||||| | || ||| ||| || || ||| | ||||| |||||||| Sbjct 78016 CTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCTATCTTCTGGTTGAA 78075 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| ||||| | |||||||| ||||||||| ||| ||| | ||||| || || ||||| Sbjct 78076 GAAGCGTGGCTTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATATCTCGTGATGAGGG 78135 Query 61620 CATGCA 61625 |||||| Sbjct 78136 CATGCA 78141 Score = 183 bits (202), Expect = 2e-41 Identities = 371/546 (68%), Gaps = 11/546 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| ||||||||||| || |||| |||||||||||||| || ||| | || | Sbjct 76171 ATATGGCAGATGTACAAAAATGCTCAAGCGTCCTTCTGGACGGTAGAAGAGATAGACCTC 76112 Query 61147 TCCAAAGACATGAATGACTGGGAGCGT---TTATCGAGCGGTGAACAACATTTCATTAAA 61203 || | ||| | | |||||||| || ||| | |||| || ||||| Sbjct 76111 TCGCACGACCTCATGGACTGGGACCGCAAGTTAAATGCCAACGAACGGCACTTCATCTCC 76052 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 | ||| | || ||||| ||||| || ||||| ||||| || ||||| | | || || Sbjct 76051 TACGTGCTAGCCTTCTTCGCCGCCTCAGACGGCATCGTGAACGAGAACCTCGTTGAGCGG 75992 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| | | ||||| |||| | ||||| || || ||||||||||||||||| || Sbjct 75991 TTCTCTAACGAGGTCCAAGCCGCAGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATC 75932 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| || || ||||||| |||| | |||||||| |||||||||| || | | Sbjct 75931 GAGAACGTGCATTCGGAGACGTACTCCCTCCTCATCGACACGTACATCAAAGACCCCACT 75872 Query 61384 GAACGTGAACGAT--TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 || || | || | | ||| | |||||||| || | ||| | ||| ||| |||| Sbjct 75871 GAGCGCG--CGTTCCTCTTCGACGCCATCGACACCGTGCCGTGCATCAAGAAGAAGGCGG 75814 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAACGGCTAC--ATTTGGTGAACGATTGCTGGC 61499 | |||||| || |||||| | | || | ||| | || | || || | | || Sbjct 75813 ACTGGGCCCTCCGCTGGATCGC--GGACGAACGCTCCGTGTTCGCAGAGCGTCTTGTAGC 75756 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 || || | || ||||| | || || || ||||| ||||| || || ||| | || Sbjct 75755 GTTCGCCGCTGTGGAGGGCATCTTCTTTTCCGGGTCGTTCGCCGCCATATTCTGGCTCAA 75696 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| ||||| | |||||||| || ||||| |||||| |||| ||||| |||||||| Sbjct 75695 GAAGCGTGGCTTGATGCCCGGCCTCACCTTTTCCAATGAACTGATCTCACGAGACGAGGG 75636 Query 61620 CATGCA 61625 ||||| Sbjct 75635 TATGCA 75630 >seq4755 Length=85889 Score = 167 bits (184), Expect = 2e-36 Identities = 409/629 (65%), Gaps = 51/629 (8%) Strand=Plus/Plus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || ||||| |||||||| || || ||||| |||||||| || || |||||| | ||| Sbjct 31481 AAAAGATCGGGTATCCAAAGCGCATAGAATAGATCGCGGGCGCGAACCTCCTCCTTTCCG 31540 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || ||||| | ||| | |||||| |||| |||||| ||||| || || ||||||||| Sbjct 31541 TGGTTCTTGCGAAGGTCAATGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATG 31600 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 ||||| | ||| ||| ||| |||||| || |||||||| ||||| | | | | Sbjct 31601 GCGAAAGCGCCGGGACGCTTGTTGCCACCCTGATCGACGTAACGAGCAGTAGCATCGTAT 31660 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGAT---------- 66573 || |||||||| || |||| ||||| || | ||| ||||| || | || Sbjct 31661 ACCCGCAACATAGGGACGATGCCGTTGGAATAGCCGTTGGTACCCGCAATGTAAGAGCTA 31720 Query 66574 ------------------------GGGGGA--------------TCCTCGT-GCCCGTAT 66594 || ||| || ||| || || || Sbjct 31721 GAAAACTATGAGCTTATGGCAAGCGGCGGAATACCGAGGCACGCACCCCGTAGCACGGAT 31780 Query 66595 ATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCAC 66654 | ||| | || | |||||| || || |||||||| ||| ||||| || || Sbjct 31781 GTTGTGGATGTTGATACCAATGCCGCCAGCCGTCTTACTGATCATGGCACAGTCCTTCAG 31840 Query 66655 TGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAG 66714 ||| | | || || || ||||||||| |||| || | || |||| |||| || || || Sbjct 31841 CGTCGAGTAGATACCCTCGATGGAGTCATCCTTCATCGACACGAGGAAGCAAGAGCTGAG 31900 Query 66715 TTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCG 66774 ||||| ||||| ||| |||| ||| || || |||| || || || |||||| | Sbjct 31901 CTGGGGGTTGGGAGTGCCGGCGTTGAACAGTGTAGGTGACGCATGGGTGAAGTAACGCTC 31960 Query 66775 AGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC 66834 |||||| ||||| |||||||| | || |||| || || || |||| || Sbjct 31961 GGACATGAGGTTGTAGGTCTCGATCGCGCGCTCGATGTCGGATCCGTGGATGCCGACAGC 32020 Query 66835 -ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGT 66893 ||| ||||| || | || |||||| || ||| | | ||| | ||||| | || | | Sbjct 32021 GACA-CGCATGAGCAAGTGTTGAGGACGCTCGGCAACGCGACCATTGATCTTCAGGAGAT 32079 Query 66894 AGGAGCGTTCCAGGGTCTTGATACCAAAG 66922 |||| || || || ||||||| || ||| Sbjct 32080 AGGAACGCTCGAGCGTCTTGAACCCGAAG 32108 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 65710 ACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACG 65769 |||||||| ||||| ||||| || |||||||| || || | | || || | || Sbjct 30761 ACAGCTGGCCTCGACGGCGGCGTGGTAGATGGTCTCAAAGATCTGCAGGTTCAGCTTGCG 30820 Query 65770 TGCCTCATCGCTCTCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGA 65827 |||||| | ||| | ||||| | | || || || | |||||||||||| || Sbjct 30821 CGCCTCAGGGGAGTCGAAGGGCATGCGGAG--GGCCATGAAGGCGTCGGCCAGACCCTGC 30878 Query 65828 ACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAG 65887 || || |||||||||||||| || |||| || ||||| |||||||| || | || ||| Sbjct 30879 ACACCGATACCGATGGGACGGTGGCGCATGTTTGAACGCCTCGCCTCGGGGATCGGATAG 30938 Query 65888 TAATTGATATCGATAATGCGATTCA 65912 || |||| ||||| ||||| |||| Sbjct 30939 TAGTTGACGTCGATGATGCGGTTCA 30963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397542217839440