Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq125 105 3e-17 >seq125 Length=315652 Score = 105 bits (116), Expect = 3e-17 Identities = 118/154 (77%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || |||||||| || ||||||| | | ||||||||||||||||| ||| ||||| Sbjct 28995 CCGATGGTCATACGGGACGGAATGGCGTGGGGGTTGATGATGATGTCGGGCGTGATGCCC 28936 Query 364484 TCAGCGGTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || ||||| || ||||| || || || || | | ||| ||| ||||| ||||| || | Sbjct 28935 TCTGCGGTGAACGGCATGTCCTCCTGGCGGTAGG-TGATACCGATGGTACCCTTCTGACC 28877 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576 | |||||||| ||||||||||| || ||||| Sbjct 28876 GTGACGAGAAGCGAACTTGTCGCCGAT--CTGGG 28845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884757897280653