Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1479 298 8e-79 seq639 298 8e-79 >seq1479 Length=14250 Score = 298 bits (330), Expect = 8e-79 Identities = 207/231 (90%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 771 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 828 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 829 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 888 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||| ||| ||||| || | ||||||||||||||||||| Sbjct 889 ACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 948 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 949 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 999 >seq639 Length=11368 Score = 298 bits (330), Expect = 8e-79 Identities = 207/231 (90%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 10726 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 10783 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 10784 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 10843 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||| ||| ||||| || | ||||||||||||||||||| Sbjct 10844 ACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 10903 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10904 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 10954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751987389665