Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq639 520 4e-145 seq1556 93.3 2e-16 >seq639 Length=11368 Score = 520 bits (576), Expect = 4e-145 Identities = 536/694 (77%), Gaps = 39/694 (6%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| || | || | |||||| |||||||||||||||||| | ||||||||||| ||| Sbjct 9774 TGTGATGCGCTCTCAAAGAGTCGCGTTGTTTGGGAATGCAGCGCAAAATGGGAGGTGAAT 9715 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | ||||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 9714 TCCTTCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 9655 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||||||||||||||||| || ||||||||||| | |||||||| ||||| Sbjct 9654 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGCTAAAAGGGAAACGCTT 9595 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG-GTGCACTCTTCTGCGG 261 | | ||| | | | | | |||| | | ||||| ||||||| | | | | Sbjct 9594 GAAGTCAGTCGCGTCGTCCGGAACTCAGCTTTGCT-TCGGCTTAGTGCACTTTCCGGTTG 9536 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 | |||||||||| | | | | ||| || ||| |||||||||| || |||||| Sbjct 9535 ACGGGCCAGCATCGATTTTGACCGCTGGAAAAGGGCTGGAGGAATGTGGCACC-TTCGGG 9477 Query 322 GGGTGTTATAGCCC-------------------GGGGT---GGAATGCGGCCCGCCTG-- 357 | |||||||||| ||| | |||| || || ||||| Sbjct 9476 TG-TGTTATAGCCTTCAGTCGCATACAGCGGTTGGGATCGAGGAACGCAGCGCGCCTTAT 9418 Query 358 GACTGAGGTCCGCGCTC-----CGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGT 412 | ||| ||| ||| | | || |||||||||||| |||||| | ||| || ||||| Sbjct 9417 GGCTGGGGTTCGCCCACATTCGCGCTTAGGATGCTGGCATAATGGCTTTAAACGACCCGT 9358 Query 413 CTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGC 472 |||| |||||||||||||||||||||||| |||||||||||||||| ||||||| || Sbjct 9357 CTTGAAACACGGACCAAGGAGTCTAACATGCCTGCGAGTGTTTGGGTGGAAAACCCGAGC 9298 Query 473 GCGTAATGAAAGTGAACGGAGGTGGGAACCC-GT-GAGG-GTGCACCATCGACCGATCCT 529 |||||||||||||||| || || || | | || | || | ||| | || ||| ||| Sbjct 9297 GCGTAATGAAAGTGAA---AGTTGAGACCTCTGTCGTGGAGGGCATCGACGCCCGGACCT 9241 Query 530 GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT 589 || || ||| || |||| | | ||||||| |||||||||||||||||||||||||| Sbjct 9240 GACGTTTTCTGAAGGATCCGCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACT 9181 Query 590 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGT 649 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| Sbjct 9180 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGT 9121 Query 650 GCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||||||||||||| Sbjct 9120 GCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 9087 >seq1556 Length=31121 Score = 93.3 bits (102), Expect = 2e-16 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 30769 TGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 30827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079962870050