Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1479 360 3e-97 seq639 360 3e-97 >seq1479 Length=14250 Score = 360 bits (398), Expect = 3e-97 Identities = 234/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 916 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 975 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 976 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 1035 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 1036 ACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 1095 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1096 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 1155 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 1156 AGAGCTATCAATCTGTC 1172 >seq639 Length=11368 Score = 360 bits (398), Expect = 3e-97 Identities = 234/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10871 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 10930 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 10931 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 10990 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 10991 ACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 11050 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 11051 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 11110 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 11111 AGAGCTATCAATCTGTC 11127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796786638411