Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq744 75.2 2e-11 >seq744 Length=60166 Score = 75.2 bits (82), Expect = 2e-11 Identities = 86/116 (74%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||||||| |||| ||| || ||| | |||||| ||||||| | |||||| ||| Sbjct 47003 GATAGGGACCATACTGACTCACGTCGTATTAAACCCAACTCGCGTAACCTTTTAATCGGC 46944 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||| ||||||| | || || | || ||||| | ||| |||||||| Sbjct 46943 GAACAGCCGAACCCTTCCAAGCTTCTACCCCCGGAGGATAGGTTGAGTCGACATCG 46888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780786906716