Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1492 517 4e-144 seq639 259 2e-66 >seq1492 Length=16596 Score = 517 bits (572), Expect = 4e-144 Identities = 349/389 (90%), Gaps = 4/389 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 11825 CTTTTGTTCTACTCGAGATTTCTGTTCTCGATGAGTCCCCCTTAGGACACCTGCGTTATC 11766 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 11765 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 11706 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGT-CGGTGAAGACCAGTTCCGCTTCATTG 185 ||||| ||||||||| | |||| || ||| | || || |||| ||||| |||||| Sbjct 11705 AGCCCGTAAAGGACCTTGAAGCCAAAAGGTGGGACTGTTAATCCCAGCTCCGCCTCATTG 11646 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 | |||||||||| ||||||||||||||||||||||| |||||||| |||||||||| Sbjct 11645 AATAAGTAAAAAGACGATAAGGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCCACTT 11589 Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 |||||||||| | | ||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 11588 ATTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 11529 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 11528 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 11469 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATT 394 ||||||||||||||||||||||||||||| Sbjct 11468 AGGGACAGTGGGAATCTCGTTAATCCATT 11440 >seq639 Length=11368 Score = 259 bits (286), Expect = 2e-66 Identities = 145/146 (99%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7683 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 7742 Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7743 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 7802 Query 518 TCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||| ||||||||| Sbjct 7803 TCACATTGCGTCAACACCACTTTCTG 7828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635171694688