Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1492 161 2e-37 >seq1492 Length=16596 Score = 161 bits (178), Expect = 2e-37 Identities = 215/284 (76%), Gaps = 11/284 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 12150 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 12207 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 12208 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 12267 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC-CCCG 177 ||| | |||| | ||| |||||| ||| | | ||||| |||||||| | | Sbjct 12268 GAA-ACGATGATGTTGGTCCCGCACATACGAGTTGTGTTGAAATAGAGCTTCGGCTCGTG 12326 Query 178 AACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGC-GGGGCGCTCAGCTGGCGGA 235 |||| | ||||| | | || || || |||||| || || || | | | ||| | Sbjct 12327 AACCAAATCAGGCAGAC-TGGGTCGGCCGAGCGGAAATGCTTGGTCGGTTTGTTTGCGAA 12385 Query 236 TTGCAATT-TCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||| ||| ||| || ||| | ||||||||||||||||| Sbjct 12386 TTGCAATTATCA-TATGGGCGGGGGTGAATCCTTTGCAGACGAC 12428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819186262784