Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1532 230 2e-55 seq865 136 3e-27 seq636 114 1e-20 >seq1532 Length=168184 Score = 230 bits (254), Expect = 2e-55 Identities = 379/544 (70%), Gaps = 7/544 (1%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| || || ||||| ||||| | ||||||| | ||| | Sbjct 154938 ATTTGGCAGATGTACAAGAAGGCTGAGGCGTCCTTTTGGACCGCGGAGGAGATGGATCTC 154997 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAA 61203 ||||| |||||| | |||||| | ||| | | | | || | || ||| | Sbjct 154998 TCCAAGGACATGCACGACTGGAACAACCGTCTCACCAATGACGAGCGCCACTTCGTCTCG 155057 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || || | |||||||| ||||| |||||||| |||||||| |||||| | | || || Sbjct 155058 CACGTTCTCGCGTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAATCTCGTCGAGCGG 155117 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| | | ||||| |||| | ||||| || || ||||| ||||||||||| ||| Sbjct 155118 TTCTCCAACGAGGTCCAAGCTGCTGAGGCTCGCTGCTTCTATGGCTTCCAGATCATGATG 155177 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCG 61383 ||||| ||||||| |||| ||| | |||||||| || ||||||| ||| | | Sbjct 155178 GAGAACATCCACTCCGAGACCTACTCGCTCCTCATCGACACCTACATCAAGGACCCCCAG 155237 Query 61384 GAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGAT 61443 || || ||||| ||||| |||| ||||| || || || | ||| ||| || || Sbjct 155238 GAGCGCGAACGCCTGTTCGATGCTATCGATACCATTCCTTGCATCAAGAAGAAGGCCGAC 155297 Query 61444 TGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCAT 61501 |||||| | |||||| || |||| | || | || ||| || | | || | Sbjct 155298 TGGGCCCTGCGCTGGATCTCC--GACAAGGAGTCTGCGTTCTCTGAGCGTCTCATTGCCT 155355 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 | || | |||||||| | || ||| || || || ||| | ||||| ||| | |||| Sbjct 155356 TCGCCGCTGTCGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGA 155415 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | ||||| | ||||| || || |||||| ||| ||| |||| || |||||||| |||| Sbjct 155416 AGCGTGGCTTGATGCCTGGGCTCACCTTCTCCAACGAGCTGATCTCTCGCGACGAAGGCA 155475 Query 61622 TGCA 61625 |||| Sbjct 155476 TGCA 155479 Score = 161 bits (178), Expect = 8e-35 Identities = 367/545 (67%), Gaps = 9/545 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| | || |||| || ||||||||||| |||||| | | | Sbjct 153581 ATATGGCAGATGTACAAGACCGCCCAAGCGTCGTTCTGGACGGTCGAGGAGATTAACCTC 153522 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATC-GAGCGGT---GAACAACATTTCATTAA 61202 || | || | | |||||| |||| | | || || | || | ||| ||||| Sbjct 153521 TCATACGATCTCATGGACTGG-AGCGACAAGCTGAACGATAACGAGCGACACTTCATCTC 153463 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 | ||| | || ||||| |||||||| ||||| || ||||| |||||| | | || || Sbjct 153462 CTACGTGCTCGCCTTCTTCGCCGCTTCAGACGGCATAGTCAACGAGAATCTCGTCGAGCG 153403 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | | |||||||| | ||||||| || || |||||||||||||| || || Sbjct 153402 GTTCTCCAACGAGGTGCAGGCCGCGGAGGCCCGCTGCTTCTACGGCTTCCAAATCATGAT 153343 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || || ||||| |||| ||| | |||||||| || |||||| | || | || Sbjct 153342 GGAAAACGTACACTCCGAGACATACTCGCTCCTCATCGACACCTACATCCGCGACCCCGC 153283 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 ||||| | | ||| | || ||||| || || ||| | ||| ||| || || Sbjct 153282 AGAACGCGCCTACCTCTTCGACGCGATCGACACCATTCCGTGCATCAAGAAGAAGGCAGA 153223 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGGCTAC--ATTTGGTGAACGATTGCTGGCA 61500 ||||| || |||||| ||| || | ||| | || | || || | | || Sbjct 153222 CTGGGCGTTGCGCTGGATC-GCAG-ACGAGCGCTCCGTCTTCGCCGAGCGGCTCGTCGCG 153165 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | |||||||| | || ||| || || || ||||| ||||| ||| | ||| Sbjct 153164 TTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCCTTCGCCGCCATCTTCTGGCTCAAG 153105 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || || ||||| ||||| || |||| ||| || ||| | || |||||||||||| Sbjct 153104 AAGCGCGGACTCATGCCGGGCTTGACGTTCTCGAACGAGCTCATCAGCCGCGACGAGGGC 153045 Query 61621 ATGCA 61625 ||||| Sbjct 153044 ATGCA 153040 Score = 86.0 bits (94), Expect = 5e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || ||| |||| ||||| || ||||||||||| | || |||| ||||| || || Sbjct 152877 GAGGCTCTGCCTGTCTCTCTGATCGGCATGAACGCCGAGCTGATGTGCCAGTACATCGAG 152818 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || || || ||||| ||| | |||| | || | || | ||| ||| ||| Sbjct 152817 TTCGTCGCAGACCGGCTGCTCGTCGCGCTCGGCAGCGAGAAGCACTACCGCGCGACGAAC 152758 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || || || |||||||||||||| ||||| ||||||||||| || |||||||| || Sbjct 152757 CCGTTCGACTTCATGGACATGATCTCGCTCACCGGCAAGACGAACTTCTTCGAGAAGCGC 152698 Query 61918 GT 61919 || Sbjct 152697 GT 152696 >seq865 Length=134895 Score = 136 bits (150), Expect = 3e-27 Identities = 171/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || ||||| ||||||||||| |||||||| |||||||| || || ||||| ||||| Sbjct 114253 AAAAGATCGGGTATCCAGAGCGCGTAGAACAGATCGCGGGCACGGACTTCCTCTTTGCCG 114312 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || ||||||| || | |||||| |||| |||||| ||||| || || ||||||||| Sbjct 114313 TGGTTCTTGCGCAGATCAATGAACTCGAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATG 114372 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTG--TTGA 66521 ||||| | || || ||| || || || |||||||| ||||| | | | | | Sbjct 114373 GCGAATGCTCCGGGGCGCTTGTTACCCCCCTGATCGACGTAACGAGC--CGTCGCATCGT 114430 Query 66522 AGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 | || || | ||| || |||| |||||| || | ||| || || ||| | ||| Sbjct 114431 ATACGCGAAGCATAGGGACGATCCCGTTCGAGTAGCCGTTCGTCCCGGCAATG 114483 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 65711 CAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGT 65770 ||||| | ||||| || ||| || ||||||||||| || | | || || | || Sbjct 113536 CAGCTCGCCTCGACCGCCGCATGGTAGATGGTCTCGAAGATCTGCTGGTTGAGCTTGCGC 113595 Query 65771 GCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACT 65830 |||||| ||| ||| | ||||| | | | | || | || |||| ||||| || Sbjct 113596 GCCTCAACGCCATCGAAGGGCATCCGAAGCGCCATGAACGCATCCGCCAAGCCTTGCACG 113655 Query 65831 CCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAA 65890 || | |||||||||||| || |||| || |||||| ||||| || | ||||||| Sbjct 113656 CCCACACCGATGGGACGGTGGCGCATGTTTGAACGTTGGGCCTCGGGAATGGGGTAGTGG 113715 Query 65891 TTGATATCGATAATGCGATT 65910 |||| ||||| ||||| || Sbjct 113716 TTGACGTCGATGATGCGGTT 113735 >seq636 Length=11643 Score = 114 bits (126), Expect = 1e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || ||||| ||||||||||| |||||||| |||||||| || || ||||| ||||| Sbjct 7240 AAAAGATCGGGTATCCAGAGCGCGTAGAACAGATCGCGGGCACGGACTTCCTCCTTGCCG 7181 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || ||||||| || | |||||| |||| || || ||||| || || ||||||||| Sbjct 7180 TGGTTCTTGCGCAGATCAATGAACTCGAAGACATCAGCGTGCCAGGGCTCAAGGTAGATG 7121 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504 ||||| | || |||| | ||| || || |||||||| Sbjct 7120 GCGAATGCTCCGGGGCGTTCGTTGCCCCCCTGATCGACGTA 7080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397559612681840