Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09]
1,731 sequences; 39,739,821 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq209 96.9 1e-14
seq1142 86.0 3e-11
>seq209
Length=23961
Score = 96.9 bits (106), Expect = 1e-14
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 349069 CGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGAC 349128
|| ||||| || |||||||||| | |||| || || || |||||| ||| ||||||
Sbjct 16589 CGCGGCGTTGATGATCTCCTTGATGCGCGGCACCCCAAGCGTGACGTTCATGGACGCGAC 16530
Query 349129 GCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCC 349188
||| ||||| ||||| |||| || |||| ||||||| |||||||||||| |||| |
Sbjct 16529 GCCCGCAAAATGGAACGTCTTCAGCGTCATCTGCGTGCCCGGCTCGCCGATGGACTGCGC 16470
Query 349189 CGCGAGGATGCCTACCATCTCGCCGGGCGCG 349219
||| | ||| || || ||||||| ||
Sbjct 16469 GCCGACGGCGCCGACAGTCGAGCCGGGCTCG 16439
>seq1142
Length=134542
Score = 86.0 bits (94), Expect = 3e-11
Identities = 118/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 349051 GGGCTTCTTCATCTTGGGCGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGT 349110
|||| |||| || |||| || | ||| || || ||||| || | || | || || ||
Sbjct 59823 GGGCGTCTTGATGTTGGTCGCGACGTTGATGATTTCCTTCAGACGCGGGACACCGAGAGT 59764
Query 349111 CACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGG 349170
|||||||| | ||| ||||| | |||||||| | |||||||| |||||| |||
Sbjct 59763 GACGTTCTTACTGGAGACACCGGCGTAATGGAAGGTGTTGAGGGTCATCTGCGTCGCGGG 59704
Query 349171 CTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGG 349215
||| ||||| |||| |||| || | || ||||||||||||
Sbjct 59703 CTCTCCGATCGACTGCGCCGCAAGAGTACCACACATCTCGCCGGG 59659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084691836028338
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |