Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1544 91.5 6e-13 >seq1544 Length=70546 Score = 91.5 bits (100), Expect = 6e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || |||||||| |||||||||| | | ||||||||||||||||| ||| ||||| Sbjct 23729 CCGATGGTCATACGGGAGGGAATGGCGTGCGGGTTGATGATGATGTCGGGCGTGATGCCC 23788 Query 364484 TCAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || || || ||||| | || | || || | | ||| ||| || || ||||| || | Sbjct 23789 TCCGCCGTGAACGGCATGTCCTCCTGGCGGTA-GGTGATACCGATAGTACCCTTCTGTCC 23847 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || || ||||||||||| || Sbjct 23848 GTGACGTGAGGCGAACTTGTCGCCGAT 23874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884844596164783