Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30]
306 sequences; 38,904,488 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq21 405 9e-111
>seq21
Length=580701
Score = 405 bits (448), Expect = 9e-111
Identities = 279/313 (89%), Gaps = 2/313 (1%)
Strand=Plus/Plus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65
||| ||| ||| ||| ||| ||| || ||| |||||||||||||||||||| ||||||
Sbjct 363646 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCCCTTCACTGGGTGTGTCGGGGAA 363705
Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125
||||||||||||| |||| |||||||||||||||||||||||| | ||| ||||||||||
Sbjct 363706 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCTTATGCCCGAATACATT 363765
Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 363766 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 363825
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||||||||||||| ||||| | |||||||| ||| ||||||||||||||||||
Sbjct 363826 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 363885
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
|||| ||||||||||||||||||||||| || |||||||||||||||||||||| |||
Sbjct 363886 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 363944
Query 306 CGAAAGTTAGGGG 318
|||| ||||||||
Sbjct 363945 CGAAGGTTAGGGG 363957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915197199488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |