Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq21 360 3e-97 >seq21 Length=580701 Score = 360 bits (398), Expect = 3e-97 Identities = 234/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 364459 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 364400 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 364399 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 364340 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 364339 ACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 364280 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 364279 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 364220 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 364219 AGAGCTATCAATCTGTC 364203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797637986