Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq27 86.0 1e-14 >seq27 Length=441287 Score = 86.0 bits (94), Expect = 1e-14 Identities = 167/243 (69%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||| |||||||| |||| | | | | ||||| ||||| ||||||| || | || Sbjct 114490 TTCGCCGTGGTTTCCCTGGTGGCCCGTGACACCGAAGAGGCGTTCCTTGAGTATGCGGTC 114549 Query 109 G-CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCG 167 ||| |||||||||| | || || | ||| ||| || ||||| || || Sbjct 114550 CTCGC-CGTTCCACAGCGAGAGCCCGAAGCAAAGACGCTGGTGATTGTCGGAGATACCAC 114608 Query 168 CCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGG 227 ||||||||||||| ||||| | ||| |||| ||| ||||| ||||||||||| | | Sbjct 114609 CCAGGCCGTCCTCACCCCACCTGTACACGCGCGAGCGAGCATGCTCATGGGGGAAATGGC 114668 Query 228 CCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCG-TTCGCTC 286 ||||||||| || | || ||| || ||||| || || || || ||| ||| || Sbjct 114669 TCCAGGCGTCACCGTTTGCAGAGTAATCCTCGCGTACGGTAGCCTATATGCGCGTCGATC 114728 Query 287 AGG 289 ||| Sbjct 114729 AGG 114731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007996915520