Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq21 470 3e-130 >seq21 Length=580701 Score = 470 bits (520), Expect = 3e-130 Identities = 291/310 (94%), Gaps = 1/310 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 364294 GAACGAGACCTTAACCTGCTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 364353 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| || |||||||||||||||||||||||||||||||||||| Sbjct 364354 AGGGACTGTCTGCGTCTAGCAGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 364413 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| Sbjct 364414 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTATAACCTTGGCC 364473 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 364474 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 364533 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 364534 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 364593 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 364594 GCCCTTTGTA 364603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947197101568