Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq8 217 1e-51 seq2 138 9e-28 >seq8 Length=958091 Score = 217 bits (240), Expect = 1e-51 Identities = 395/572 (69%), Gaps = 11/572 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || ||||||||||||| |||||| | || ||| Sbjct 469117 ATCTGGCAGATGTACAAGAAGGCTGAGGCGTCCTTCTGGACGGCAGAGGAGATGGACTTG 469176 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || || | |||||| | | | | ||| || ||| | | | |||||| Sbjct 469177 TCCAAGGATCTGCACGACTGGAACAACAAGCTCACCGA-CGATGAGCGATACTTCATTTC 469235 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| |||||||| |||||||| ||||| | | || | Sbjct 469236 GCACGTCCTCGCATTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTCGTCGAGAG 469295 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 || | | ||||| || | |||| ||||| || |||||||||||||||||| || Sbjct 469296 GTTTTCCAACGAGGTTCAGGCAGCGGAAGCGCGCTGCTTCTACGGCTTCCAGATTATGAT 469355 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| |||||||||||| ||| | ||||| ||||| ||||||| ||| | || Sbjct 469356 GGAGAACATCCACTCGGAGACCTACTCGCTCCTCATTGATACCTACATCAAGGACCCCGC 469415 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | || || | | ||| | |||||||| || || || | ||| ||| || || Sbjct 469416 TCAGCGCGAGCACCTCTTCGACGCCATCGACACCATTCCTTGCATCAAGAAGAAGGCCGA 469475 Query 61443 TTGGGC-CTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGC 61499 ||||| |||| ||||| || |||| | || | || | || || | | || Sbjct 469476 CTGGGCTCTTC-GCTGGATTTCC--GACAAGGAGTCTGCGTTCGCCGAGCGTCTCATCGC 469532 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 || || | || |||||| | || ||| |||||| || ||| | ||||| ||| | || Sbjct 469533 CTTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGATCCTTCGCCTCCATCTTCTGGCTCAA 469592 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| ||||| | ||||| || || || ||| ||| ||| | || || ||||| ||||| Sbjct 469593 GAAGCGTGGCTTGATGCCTGGCCTCACGTTCTCCAACGAGCTCATCTCCCGCGATGAGGG 469652 Query 61620 CATGCATTGTGATTTTGCTGTTTTGCTATTCA 61651 |||||| || || || |||||| |||| Sbjct 469653 CATGCACACCGACTTCGCGTGTTTGCTCTTCA 469684 Score = 196 bits (216), Expect = 4e-45 Identities = 555/842 (66%), Gaps = 18/842 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| | || |||| ||||| ||||| || |||||| | | | Sbjct 467745 ATATGGCAGATGTACAAGACTGCCCAAGCGTCCTTTTGGACAGTCGAGGAGATTAACCTC 467686 Query 61147 TCCAAAGACATGAATGACTGGGA--GC--GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 || | ||| | | |||||| | || | | | ||| | || | || ||||| Sbjct 467685 TCGTATGACCTTATGGACTGGAATGGCAAGCTAAACGA-CAACGAGCGGCACTTCATCTC 467627 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 | ||| | || || || ||||| ||||| || ||||| || || || | ||||||| Sbjct 467626 CTACGTGCTCGCCTTTTTCGCCGCCTCGGATGGCATCGTGAACGAAAACCTCGTGGAACG 467567 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | | |||||||| | |||||||||| || || || |||||||| || || Sbjct 467566 CTTCTCCAACGAGGTGCAGGCCGCGGAGGCGCGCTGCTTTTATGGCTTCCAAATCATGAT 467507 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||||| || ||| | |||| |||| | |||||||| || |||||| | || | || Sbjct 467506 CGAGAACGTGCACGCCGAGACGTACTCGCTCCTCATCGACACCTACATCCGCGACCCCGC 467447 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 || || | | ||| | |||||||| || ||||| | ||| ||| || || Sbjct 467446 CGAGCGCGCCTTCCTCTTCGACGCCATCGACACCATACCCTGCATCAAGAAGAAGGCCGA 467387 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGG--CTACATTTGGTGAACGATTGCTGGCA 61500 |||||| || |||||| | | || | | || | |||| || || | | || Sbjct 467386 CTGGGCCCTCCGGTGGATCGC--GGACGAGCGTTCTGCTTTTGCGGAGCGGCTCGTCGCG 467329 Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | |||||||| || || ||| || ||||| ||||| ||||| ||| | ||| Sbjct 467328 TTCGCCGCCGTCGAGGGCGTCTTCTTCTCCGGCTCGTTCGCCGCCATCTTCTGGCTCAAG 467269 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || || || || |||||||| || || ||| ||| ||| | || || |||||||||||| Sbjct 467268 AAGCGCGGGCTCATGCCCGGCCTCACGTTCTCCAACGAGCTCATCTCCCGCGACGAGGGC 467209 Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG--TCGG 61678 |||||| || || || | || ||| | | | || | | || ||| | Sbjct 467208 ATGCATACCGACTTCGCGTGCCTCCTCTTCCACCAC-CTCCGCCG--GCGGCCGCACCCC 467152 Query 61679 AGGAGCGTG-TGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 | ||||| | | || || ||||| || ||||| |||| || || || Sbjct 467151 CGCCGCGTGCTCCG---CATCGTCGCCGAGGCCGTCGAGATCGAGAAGGAGTTCCTCACG 467095 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || || | || ||||| |||||||||||||| | || |||| ||||| || || Sbjct 467094 GAGGCGCTCCCGGTCTCGCTCATCGGCATGAACGCGCGGCTGATGTGCCAGTACATCGAG 467035 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || || || ||||| ||| | |||| | || | || | ||| || ||| Sbjct 467034 TTCGTCGCGGACCGCCTGCTCGTCGCGCTCGGGAACGAGAAGCACTACCGCGCGGCGAAC 466975 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || ||||| |||||||||||||| ||||| ||||||||||| || |||||||| || Sbjct 466974 CCGTTTGACTTCATGGACATGATCTCGCTCACCGGCAAGACGAACTTCTTCGAGAAGCGC 466915 Query 61918 GT 61919 || Sbjct 466914 GT 466913 >seq2 Length=1603695 Score = 138 bits (152), Expect = 9e-28 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || || || |||| ||||||||||||||| ||||| || || || |||||| ||||| Sbjct 1472043 AAGAGGTCGGGTACCCAGAGGGCGTAGAAAAGATCACGAGCGCGGACCTCCTCCTTGCCG 1471984 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || ||||| | ||||| ||| || || | ||||| ||||| || |||| ||||||| Sbjct 1471983 TGGTTCTTGCGGAGGTCGATGAATTCGAACACATCGGCGTGCCAGGGCTCCAAGTAGATG 1471924 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 ||||||| || || ||| ||||| || |||||||| || || || | | Sbjct 1471923 GCGAACGCTCCAGGCCGCTTGTTACCACCCTGATCGACGTAACGGGCTGTCGCGTCGTAA 1471864 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 ||||| | ||| || |||| ||||| || | ||| ||||| ||| ||||| Sbjct 1471863 ACACGGAGCATGGGAACGATTCCGTTGGAGTAGCCGTTGGTCCCGGCGATG 1471813 Score = 91.5 bits (100), Expect = 1e-13 Identities = 263/404 (65%), Gaps = 22/404 (5%) Strand=Plus/Minus Query 65710 ACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACG 65769 |||||||| ||||| || || || |||||||| || || | | || || | || Sbjct 1472764 ACAGCTGGCCTCGACCGCCGCGTGGTAGATGGTCTCAAAGATCTGCTGGTTGAGCTTGCG 1472705 Query 65770 TGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAAC 65829 |||||| ||| | |||| || | | | || | ||| ||||||||||| || Sbjct 1472704 TGCCTCGGGAGAGTCGAAGGGCAGACGAAGCGCCATGAACGCGTCCGCCAGACCTTGCAC 1472645 Query 65830 TCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTA 65889 || | |||||| || || ||||||| ||||| || | |||||||| | ||||||| Sbjct 1472644 ACCGACACCGATAGGGCGGTGACGCATGTTGGAGCGCTTAGCCTCAGGGATTGGGTAGTG 1472585 Query 65890 ATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTC--GCAAT 65947 |||| |||||| ||||| || | ||| | ||||| | || ||||| ||| Sbjct 1472584 GTTGACATCGATGATGCGGTTGAGGTTGAAGGCGACCACCT--TCGTAACGTCGTGCAGC 1472527 Query 65948 TGTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGG 66007 | | ||||| ||| || |||| | | | ||| |||||| Sbjct 1472526 TTCTGGAAAT-----TGT-----AC--------TTGCCTCCCTCGATGAACGAGGGAAGA 1472485 Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 || | ||| || | |||||| ||||| ||||||| || | || ||||| || |||||| Sbjct 1472484 GCGATAGAGGCCAAGTTGCAAACAGCGGTCTCGTCCGGCGAGGAGTACTCCACGATTTCG 1472425 Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT 66111 ||||| ||||| | | || ||||| | |||||| || || Sbjct 1472424 GTGCATAGATTCGAGGACTTGATAGTGCCGAGATTCTGCTGGTT 1472381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566517319840