Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04]
3,502 sequences; 23,635,607 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq591 277 3e-72
seq2472 181 2e-43
>seq591
Length=3483
Score = 277 bits (306), Expect = 3e-72
Identities = 206/237 (87%), Gaps = 3/237 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| | |||||| ||||||||||| ||| |
Sbjct 860 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTGG-TGACTCACGCTTACTAGGTATT-C 917
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 918 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACCGAGTTTCACAAGATT 977
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||| |||| ||||| ||| ||||| || | |||||||||||||||||||
Sbjct 978 ACCCAACCCTCTCGGGCAAGGCGATGAACTCGCTGGCTCGGTCAGTGTAGCGCGCGTGCG 1037
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1038 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGACTA 1094
>seq2472
Length=4788
Score = 181 bits (200), Expect = 2e-43
Identities = 193/250 (77%), Gaps = 16/250 (6%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTT----ACTAGGAA 56
|||||||||||||||||||| |||||||||||| | |||||| ||||| |||||| |
Sbjct 4280 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTGG-TGACTCACGCTTGCTTACTAGGTA 4222
Query 57 TTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AA 115
|| ||| ||||| || ||| |||||||||| ||| | |||| |||| | || | ||| ||
Sbjct 4221 TT-CCTTGTTGACGAGCAATAATTGCAATGCTCTTTTCCCAGCACGTTCAAGTCTCACAA 4163
Query 116 GATTACCCGGACC-----TGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGC 170
|||||||| || | |||| | ||| | | |||| || | |||||||||
Sbjct 4162 GATTACCCAACCCAATCCTCTCGGGCGAGGCGGGAAACTCTGTGGCTCGGTCAGTGTAGT 4103
Query 171 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTG----TTATTGCCTCAAACTT 226
|||| ||||||||||||||||||||| |||||||||||| ||||||||||||| ||
Sbjct 4102 GCGCATGCGGCCCAGAACATCTAAGGCTATCACAGACCTGTTACTTATTGCCTCAAAATT 4043
Query 227 CCGTGGCCTA 236
||| | |||
Sbjct 4042 TCGTTGACTA 4033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751974487930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |