Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq591 277 3e-72 seq2472 181 2e-43 >seq591 Length=3483 Score = 277 bits (306), Expect = 3e-72 Identities = 206/237 (87%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| | |||||| ||||||||||| ||| | Sbjct 860 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTGG-TGACTCACGCTTACTAGGTATT-C 917 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 918 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACCGAGTTTCACAAGATT 977 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| |||| ||||| ||| ||||| || | ||||||||||||||||||| Sbjct 978 ACCCAACCCTCTCGGGCAAGGCGATGAACTCGCTGGCTCGGTCAGTGTAGCGCGCGTGCG 1037 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236 ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 1038 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGACTA 1094 >seq2472 Length=4788 Score = 181 bits (200), Expect = 2e-43 Identities = 193/250 (77%), Gaps = 16/250 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTT----ACTAGGAA 56 |||||||||||||||||||| |||||||||||| | |||||| ||||| |||||| | Sbjct 4280 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTGG-TGACTCACGCTTGCTTACTAGGTA 4222 Query 57 TTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AA 115 || ||| ||||| || ||| |||||||||| ||| | |||| |||| | || | ||| || Sbjct 4221 TT-CCTTGTTGACGAGCAATAATTGCAATGCTCTTTTCCCAGCACGTTCAAGTCTCACAA 4163 Query 116 GATTACCCGGACC-----TGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGC 170 |||||||| || | |||| | ||| | | |||| || | ||||||||| Sbjct 4162 GATTACCCAACCCAATCCTCTCGGGCGAGGCGGGAAACTCTGTGGCTCGGTCAGTGTAGT 4103 Query 171 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTG----TTATTGCCTCAAACTT 226 |||| ||||||||||||||||||||| |||||||||||| ||||||||||||| || Sbjct 4102 GCGCATGCGGCCCAGAACATCTAAGGCTATCACAGACCTGTTACTTATTGCCTCAAAATT 4043 Query 227 CCGTGGCCTA 236 ||| | ||| Sbjct 4042 TCGTTGACTA 4033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751974487930