Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq591 289 5e-76 >seq591 Length=3483 Score = 289 bits (320), Expect = 5e-76 Identities = 253/312 (81%), Gaps = 2/312 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGC 66 ||||||||||||||| ||| ||| | |||| | || |||| ||||| | | | | | Sbjct 1815 GTCCGGCCGGGCCTTACCTCTTGGTGG-CCGCGTTCCTCTCACGGGGTGCGTGGTGTAAC 1757 Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 ||||| ||||| |||| |||||||||||||||||||||||| || || |||||||| Sbjct 1756 CAGGAACTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCAAACGCCCGGATACATTA 1697 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1696 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAA 1637 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 |||| ||| |||| |||||||| | |||||| ||| ||||||||||||||| ||| Sbjct 1636 TGATCAATGGGGACGGTCGGGGGCATTGGTATTCCTTTGCTAGAGGTGAAATTCTTAGAT 1577 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 | |||||| || ||||||||||| || ||||||| ||| || | |||| |||| Sbjct 1576 TACAGGAAGACCGACAACTGCGAAAGCATTTGCCAAGGACGTTCTCGTCGATCA-AGAAC 1518 Query 307 GAAAGTTAGGGG 318 ||| |||||||| Sbjct 1517 GAAGGTTAGGGG 1506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915167949696