Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq657 605 1e-170 >seq657 Length=3537 Score = 605 bits (670), Expect = 1e-170 Identities = 546/681 (80%), Gaps = 39/681 (6%) Strand=Plus/Minus Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAA 92 |||| | ||||||||||||||||||||||||||| ||| ||| |||||||| | ||||| Sbjct 3521 CTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAACGGGTGGTAAATTCCATCTAAG 3462 Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 ||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||| Sbjct 3461 GCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCAC 3402 Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC 212 |||||||||||||||||| ||||||||||||||||||||||||| || ||| | ||| | Sbjct 3401 TTTGGAAAGAGAGTTAAACAGCACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTC 3342 Query 213 TTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCA 272 || ||| | | ||| |||| || ||||||||| || ||| ||| | || || || Sbjct 3341 GTGTCCGGGGG-GTTCAGCCGGT---TCTGCCGGTGCATTCCTCT-CGGACGGGTCAACA 3287 Query 273 TCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAG 332 || | | | | | |||| || ||| |||||||||| || || ||| ||||||||| Sbjct 3286 TCGGTTTTGCCCGGCGGAAAAGGGCGTGAGGAATGTGGCACC--TCCGGGTGTGTTATAG 3229 Query 333 CC-------------------CGGG---GTGGAATGCGGCCCGCCTGGACTGA---GGTC 367 || |||| | |||| || || ||||| || | ||| Sbjct 3228 CCTCGCGTCGCATACGTCGGGCGGGACCGAGGAACGCAGCTCGCCTTCACGGCCGGGGTT 3169 Query 368 CGCGCTC---CG-GCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACAC 422 ||| | | || ||| |||||| || | |||||| | ||| || ||||||||| ||||| Sbjct 3168 CGCCCACGTACGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACAC 3109 Query 423 GGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAA 482 ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||| Sbjct 3108 GGACCAAGGAGTCTAACATATCTGCGAGTGTTTGGGTGTCAAACCCGAGCGCGTAATGAA 3049 Query 483 AGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGAT 542 |||||||| ||| |||| || | || ||||| ||||||||||| ||| | | ||| Sbjct 3048 AGTGAACGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCCGGATCTTCTGTGAT 2991 Query 543 GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 602 ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 2990 GGATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 2931 Query 603 GTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662 | |||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||| Sbjct 2930 GCGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGT 2871 Query 663 CAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||| Sbjct 2870 CAAATTTGGGTATAGGGGCGA 2850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079924882100