Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq3060 100 9e-19 >seq3060 Length=2880 Score = 100 bits (110), Expect = 9e-19 Identities = 230/337 (68%), Gaps = 26/337 (8%) Strand=Plus/Plus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTC-GTGAGATGTTGGGTTAAGTCCCGCAA 214 ||||||| ||||||| ||||| ||||||||||| |||||| || |||||| ||| || Sbjct 2274 ACAGGTGTTGCATGGCTGTCGCCAGCTCGTGTCAGTGAGACGTATGGTTAATTCCGTTAA 2333 Query 215 -CGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCC 273 ||||||||| ||| ||||| |||| | | || || | | Sbjct 2334 ACGAGCGCAATCCTC----------GCCATGATTATAAAG---ATTCATGGTCTCATTC- 2379 Query 274 GGTGACAAACCGGAGGAAGGTGGG--GACGACGTCAAATCATCATGCCCCTTATGATTTG 331 ||| ||| | | || | || ||| | | ||| | ||||| |||||||| | || Sbjct 2380 --TGATAAA--GAATGATTTTAGGAGGACTATGACAAGCCCTCATGGCCCTTATGGTGTG 2435 Query 332 GGCTACACACGTGCTACAATGGACAAT-ACAAAGGGCAGCGAAACCGCGAGGTCAAGCAA 390 ||||| | ||||||||||| | | | | |||| | | || | | || || | ||| | Sbjct 2436 GGCTATAGACGTGCTACAA-GAAGACTGACAATGTGTTGCAATATCGAAAGATGGAGCCA 2494 Query 391 ATCCCATAAAGT-TGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGG 449 ||| | |||| | || | | | || |||||| ||| |||||| || ||||||| || Sbjct 2495 ATCACCTAAAAAGTCTTATTA-TACGAATTGTATGCTGGAACTCGCGTACATGAAGCAGG 2553 Query 450 AATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAA 486 ||| | ||||||||||||||| || ||||||||||| Sbjct 2554 AATTCCGAGTAATCGTAGATCACCACGCTACGGTGAA 2590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503947329920