Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04]
3,502 sequences; 23,635,607 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq591 374 1e-101
seq2472 131 3e-28
>seq591
Length=3483
Score = 374 bits (414), Expect = 1e-101
Identities = 237/257 (92%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1005 ACTCGCTGGCTCGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 1064
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || || ||| | ||||||||||||||||| |
Sbjct 1065 CCTGTTATTGCCTCAAACTTCCGTCGACTAGACGCCGACAGTCCCTCTAAGAAGCCCACG 1124
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|||| | | || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1125 ACCAGCAAAAGCCGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 1184
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 1244
Query 242 AGAGCTATCAATCTGTC 258
|||||||||||||||||
Sbjct 1245 AGAGCTATCAATCTGTC 1261
>seq2472
Length=4788
Score = 131 bits (144), Expect = 3e-28
Identities = 101/120 (84%), Gaps = 4/120 (3%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
|||| ||||||| |||||||||| |||| ||||||||||||||||||||| ||||||||
Sbjct 4126 ACTCTGTGGCTCGGTCAGTGTAGTGCGCATGCGGCCCAGAACATCTAAGGCTATCACAGA 4067
Query 62 CCTG----TTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC 117
|||| ||||||||||||| || | ||| || || ||| | ||||||||| |||||||
Sbjct 4066 CCTGTTACTTATTGCCTCAAAATTTCGTTGACTAGACGCCGACAGTCCCTCTGAGAAGCC 4007
Score = 102 bits (112), Expect = 1e-19
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244
|||| |||| | |||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 4006 GACATGTCACCCAACCAACTAAGAACGACCATGCCCCACCACCCATAGAATCAAGAAAGA 3947
Query 245 GCTATCAATCTGTC 258
||||||||| ||||
Sbjct 3946 GCTATCAATGTGTC 3933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796772968062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |