Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq591 374 1e-101 seq2472 131 3e-28 >seq591 Length=3483 Score = 374 bits (414), Expect = 1e-101 Identities = 237/257 (92%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1005 ACTCGCTGGCTCGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 1064 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | || || ||| | ||||||||||||||||| | Sbjct 1065 CCTGTTATTGCCTCAAACTTCCGTCGACTAGACGCCGACAGTCCCTCTAAGAAGCCCACG 1124 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 1125 ACCAGCAAAAGCCGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 1184 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1185 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 1244 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 1245 AGAGCTATCAATCTGTC 1261 >seq2472 Length=4788 Score = 131 bits (144), Expect = 3e-28 Identities = 101/120 (84%), Gaps = 4/120 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 |||| ||||||| |||||||||| |||| ||||||||||||||||||||| |||||||| Sbjct 4126 ACTCTGTGGCTCGGTCAGTGTAGTGCGCATGCGGCCCAGAACATCTAAGGCTATCACAGA 4067 Query 62 CCTG----TTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC 117 |||| ||||||||||||| || | ||| || || ||| | ||||||||| ||||||| Sbjct 4066 CCTGTTACTTATTGCCTCAAAATTTCGTTGACTAGACGCCGACAGTCCCTCTGAGAAGCC 4007 Score = 102 bits (112), Expect = 1e-19 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244 |||| |||| | |||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct 4006 GACATGTCACCCAACCAACTAAGAACGACCATGCCCCACCACCCATAGAATCAAGAAAGA 3947 Query 245 GCTATCAATCTGTC 258 ||||||||| |||| Sbjct 3946 GCTATCAATGTGTC 3933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796772968062