Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq2793 111 4e-22 >seq2793 Length=8801 Score = 111 bits (122), Expect = 4e-22 Identities = 141/188 (75%), Gaps = 11/188 (6%) Strand=Plus/Plus Query 209 ACCCATTATACAAAAGGTACGCAGTCACCCAACAAAG-TGG----GCTCCCACTGCTTGT 263 |||||||||||||||||||| |||| || ||| | | |||| || ||||| | Sbjct 5331 ACCCATTATACAAAAGGTACATGATCACACACTAAATCTAGTCATGCTCTCATTGCTTAT 5390 Query 264 ACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCT 323 | | | | |||||||||||||||||| || || |||||||| ||||||||| Sbjct 5391 ATGATTGCTAGTTCAGGATCTATTTCACTAG--TCATCGACTTTCTTTTCACCTTTCCCT 5448 Query 324 CACGGTACTAGTTCACTATCGGTCAGT-CAGTAGTATTTAGCCTTGGAGGATGGTCCCCC 382 ||||||||| |||||||||| |||| || | || |||||||| ||| |||||| ||| Sbjct 5449 CACGGTACT-CTTCACTATCG--CAGTACATTCATACTTAGCCTTTGAGAATGGTCTCCC 5505 Query 383 CATATTCA 390 ||||||| Sbjct 5506 AATATTCA 5513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241556519168