Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04]
3,502 sequences; 23,635,607 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq591 439 5e-121
seq2472 250 5e-64
>seq591
Length=3483
Score = 439 bits (486), Expect = 5e-121
Identities = 284/310 (92%), Gaps = 1/310 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||
Sbjct 1170 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCGGCTTTTGCTGGTCGTGGGCTTCTTAG 1111
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||| ||||| || || ||| ||||||||||||||||||||||||||||||||||||
Sbjct 1110 AGGGACTGTCGGCGTCTAGTCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 1051
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| ||
Sbjct 1050 AGATGTTCTGGGCCGCACGCGCGCTACACTGACCGAGCCAGCGAGTTCATCGCCTTGCCC 991
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| ||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 990 GAGAGGGTTGGGTAATCTTGTGAAACTCGGTCGTGCTGGGGATAGAGCATTGCAATTATT 931
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||| ||||||||||| | |||| |||| ||||||||||||||||||
Sbjct 930 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCACCAGCTCGCGTTGATTACGTCCCT 871
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 870 GCCCTTTGTA 861
>seq2472
Length=4788
Score = 250 bits (276), Expect = 5e-64
Identities = 222/274 (81%), Gaps = 14/274 (5%)
Strand=Plus/Plus
Query 69 CGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAA----CAG 123
|||||||| ||||||||| ||||| || || | | | || ||||||||||||| |||
Sbjct 4006 CGGCTTCTCAGAGGGACTGTCGGCGTCTAGTCAACGAAATTTTGAGGCAATAAGTAACAG 4065
Query 124 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183
||||||||| ||||||||||||||||||||| |||| |||||||||| |||||| |||
Sbjct 4066 GTCTGTGATAGCCTTAGATGTTCTGGGCCGCATGCGCACTACACTGACCGAGCCACAGAG 4125
Query 184 TTCATCACCTTGGCCGGAAGGTCTGGG-----TAATCTTGTTAAACTCTGTCGTGCTGGG 238
|| | ||| | ||| ||| |||| ||||||||| | ||| |||||||||
Sbjct 4126 TTTCCCGCCTCGCCCGAGAGGATTGGGTTGGGTAATCTTGTGAGACTTGAACGTGCTGGG 4185
Query 239 GATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC--GCGT--GTCA 294
| ||||||||||||||||||||| ||||| |||||| |||||||||| |||| ||||
Sbjct 4186 AAAAGAGCATTGCAATTATTGCTCGTCAACAAGGAATACCTAGTAAGCAAGCGTGAGTCA 4245
Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||| ||||||||||||||||||||||||||||
Sbjct 4246 CCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 4279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947166829056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |