Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tremella_20fuciformis_20[genbank_20GCA_5F000987905.1_202015-05-04] 3,502 sequences; 23,635,607 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1542 192 5e-44 seq3392 165 6e-36 >seq1542 Length=14377 Score = 192 bits (212), Expect = 5e-44 Identities = 499/752 (66%), Gaps = 18/752 (2%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||| || || ||||||||||| || || | || || ||||| | ||||||| Sbjct 7123 GGCAGGGCGAGCGAGGCGAGGTTGCAAACGGCGACTTCATCGGGAGCAGAGTACTCGATG 7064 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||| || || | || ||||| | | ||| || || |||||| Sbjct 7063 ATCTCAGTGCAGAGGTTGGACGACTTGATTGTGCCGAGGTGCTGCTGGTTGGACTTGCGG 7004 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||| || |||||||||| |||| | || |||||||| |||| ||| | |||| Sbjct 7003 TTGGCGGCGTCCTTGTACAGCATGAAAGGTCCACCGGTCTCGGTCTGGGCCTCGAGGATG 6944 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATG 66240 ||| ||| || | ||||| | || | | | |||| | | | ||||| Sbjct 6943 GCGAACCAGAGCTTCTGAGCCTTGATGGT-CTTGCGACCCTTGCCGGCCTTCTCGTAGCC 6885 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACT---TCGGACAGACATGGACACTTGTG 66297 |||||||| | |||||| ||| || | || | ||| | || |||| | Sbjct 6884 CTCGTAGAGCTTCTCGAAG---TCATCCGAGTGGCAGTCAGCCAGGCCGGGGCACTCGGC 6828 Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357 || |||||||| | ||| || ||||| || || || ||| || || || | || Sbjct 6827 GGGGCACATCAGAGTCCAGTCGCCATCGGACTCGACGCGCTTCATGAAGAGGTCGGAGAT 6768 Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417 ||| || |||||||||||||| || || || ||||| | ||||| || || |||| Sbjct 6767 CCAAAGTGCGTAGAAGAGATCACGAGCGCGGACTTCCTCTTTACCGTGGTTCTTTCGCAG 6708 Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 ||||||||| || |||||||| || ||||| || || |||||||||||||| | || Sbjct 6707 GTCGAGGAAGTCGAAGATGTCTGCGTGCCAAGGCTCGAGGTAGATGGCGAAAGCACCGGG 6648 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC---GACATTGTTGAAGACACGCAACAT 66534 || ||| |||||| ||||| ||||| ||||| ||| || ||| |||| | ||| Sbjct 6647 TCGCTTGTTGCCACCCTGGTCCACGTATCGAGCAGTAGCATCGT--AAG-CACGGAGCAT 6591 Query 66535 CGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTAT 66594 || |||| ||||| || | ||| ||||| || | ||| || || || || || Sbjct 6590 AGGGACGATACCGTTGGAGTAGCCGTTGGTACCAGCAATGTACGAGCCCTTGGCACGGAT 6531 Query 66595 ATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGA--TGGCAGCACAATCGGCC 66652 | ||| | | |||||| ||||| || || ||||| |||| ||| ||| | Sbjct 6530 GTTGTGGATGTGCAGACCGATACCGCCAGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAG 6471 Query 66653 ACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTA 66712 | |||| | | ||||||||||| |||||| | |||| | |||| |||| || Sbjct 6470 AGTGTC--GTAGATGCCGTCAATCGAGTCATCACGCATGGCGACGAGGAAGCAAGACGAC 6413 Query 66713 AGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAG 66744 | |||| ||||||||| | || |||||| Sbjct 6412 ATCTGGGCGTTGGGTGTGCCAGCGTTGAAGAG 6381 >seq3392 Length=91092 Score = 165 bits (182), Expect = 6e-36 Identities = 399/597 (67%), Gaps = 13/597 (2%) Strand=Plus/Minus Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAG-- 61377 || |||||| ||||||| |||| ||| | |||||||| || ||||||| ||| Sbjct 44804 CAGGGAGAACATCCACTCTGAGACCTACTCACTCCTCATCGACACCTACATCAAGGACAA 44745 Query 61378 CGGGCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAA 61436 || || | ||| | | ||| | |||||||| || || ||| | ||| ||| Sbjct 44744 CGACCGCCGC---AACTACCTCTTCGAGGCCATCGACACCATCCCGTGTATCAAGAAGAA 44688 Query 61437 AGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGATTG 61494 || || ||||| |||| |||||||| | ||| | | | || || | || || | Sbjct 44687 GGCCGAGTGGGCTCTCAAGTGGATCAC--GGACACCCGATCCACCTTCGCCGAGCGCCTC 44630 Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554 | || || || | |||||||| | || ||| || ||||| || | ||||| ||| Sbjct 44629 ATCGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCGTCCATCTTCTGG 44570 Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614 ||||||| || || || ||||||||||| |||||| ||| ||| | || || || ||| Sbjct 44569 CTGAAGAAGCGCGGCCTCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCGCGTGAC 44510 Query 61615 GAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG 61674 ||||| | || || |||||| |||| |||| | | || | | | | Sbjct 44509 GAGGGTCTTCACACCGACTTTGCTTGCCTGCTCTTCACCCACC-TCCGCCGCCGCCCTCA 44451 Query 61675 TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 || || ||| | |||| | || ||||| || | ||||| ||||| || || Sbjct 44450 TCCCGAGACCGTC--GAAAAGATCATCCGCGAGGCCGTCAAGATCGAGCAGGAGTTCCTT 44393 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 |||||||| |||||||||| |||||||||||||| | ||| |||| ||||| || Sbjct 44392 ACTGACGCCCTGCCCGTCTCGCTCATCGGCATGAACTCGAAACTCATGTGCCAGTACATC 44333 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || || || |||||||| ||| | |||| | | || | || | ||| || | Sbjct 44332 GAGTTCGTCGCCGACCGCCTGCTCGTCGCTCTCGGCAACGAGAAGGTCTGGAACGTCAGC 44273 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 ||||| || || |||||||| ||||| || || | |||||| | || || |||||| Sbjct 44272 AACCCCTTCGACTTCATGGAGATGATCTCTCTCCAGGGCAAGGCCAACTTCTTCGAG 44216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397551031549280