Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03]
88,884 sequences; 131,718,925 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq309 468 9e-130
seq46002 365 8e-99
seq72664 347 2e-93
>seq309
Length=8742
Score = 468 bits (518), Expect = 9e-130
Identities = 262/264 (99%), Gaps = 0/264 (0%)
Strand=Plus/Plus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2170 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 2229
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2230 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 2289
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2290 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 2349
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2350 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCGATAGGC 2409
Query 272 CACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||
Sbjct 2410 CACACTTTCATGGTTTGTATTCAC 2433
>seq46002
Length=6512
Score = 365 bits (404), Expect = 8e-99
Identities = 238/264 (90%), Gaps = 12/264 (5%)
Strand=Plus/Plus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 717 CATCAGTAGGGCAAAACTAACCTGTCTCATGATGGTCTAAACCCAGCTCACATTCCCTAT 776
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
|||||||||| |||||||| |||||| ||||||||||| ||||||||||||||||
Sbjct 777 TAGTGGGTGATCAATCCAATGCTTACTGAATTCTGCTTTGGTATGATAGGAAGAG----- 831
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
||||||||||||| ||||||||||| ||||||| |||||||||||||||||||
Sbjct 832 -------GATCAAAAAGCAATGTCGCTATGAATGCTTGGCAGCCACAAGCCAGTTATCCC 884
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||
Sbjct 885 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCAAGGGACTAAAGGATCAATAGGC 944
Query 272 CACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||| ||
Sbjct 945 CACACTTTCATGGTTTGTATTTAC 968
>seq72664
Length=908
Score = 347 bits (384), Expect = 2e-93
Identities = 206/215 (96%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 216 CATCAGTAGGGTAAAACTAACCTGTCTCATGATGGTCTAAACCCAGCTCACGTTCCCTAT 157
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
|||||||||||||||||||| ||||| |||||||||||| ||| ||||||||||||| ||
Sbjct 156 TAGTGGGTGAACAATCCAACACTTACTGAATTCTGCTTCCGTACGATAGGAAGAGCCAAC 97
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
|||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||
Sbjct 96 ATCGAAGGATCAAAAAGCAATGTCACTATGAATGCTTGGCTGCCACAAGCCAGTTATCCC 37
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
|||||||||||||||||||||||||||||||||||
Sbjct 36 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 853640575104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |