Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03]
88,884 sequences; 131,718,925 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq309 141 2e-31
seq46002 98.7 2e-18
seq72664 93.3 7e-17
>seq309
Length=8742
Score = 141 bits (156), Expect = 2e-31
Identities = 206/282 (73%), Gaps = 7/282 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| |
Sbjct 2140 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 2083
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |
Sbjct 2082 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 2023
Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGCCCCGA 178
||| | |||| | ||| |||||| | | | | ||||| |||| | | ||
Sbjct 2022 GAA-ATGATGATGTTGGTCCCGCACATTTGACTTGAGTTAAAATAGAGCTTTGCTCGTGA 1964
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTC-CCGCGGAAGCGC-GGGGCGCTCAGCTGGCGGAT 236
||| | |||| ||| || |||| |||||| || |||| | || || ||
Sbjct 1963 ACCAAATCAGGTGGGCTTGGGCCGTCTTTGCGGAAATGCTTTGGCGGTTTGCCTACGAAT 1904
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||| | ||| || ||| | |||||||||||||||||
Sbjct 1903 TGTAATCATAATATGGGCGGGGGTGAATCCTTTGCAGACGAC 1862
>seq46002
Length=6512
Score = 98.7 bits (108), Expect = 2e-18
Identities = 85/104 (82%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79
||||||| || ||||| |||| | |||||||| |||| || | ||||||| ||||||
Sbjct 669 ATTCAGA-TATTTGGTATTTGTGCCTGTCTGATTGGGCAATGGCATGAAGCTATCATCTG 611
Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123
||| ||||||||||||| |||||||| ||||||| ||| ||||
Sbjct 610 CTGCATTATGGCTGAACACCTCTAAGCCAGAATCTGTGCTAGAA 567
>seq72664
Length=908
Score = 93.3 bits (102), Expect = 7e-17
Identities = 62/69 (90%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 55 GGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||| || ||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 288 GGCAATGGTGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAACCAGAATCC 347
Query 115 ATGCCAGAA 123
|||| ||||
Sbjct 348 ATGCTAGAA 356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 818494616576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |