Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq309 141 2e-31 seq46002 98.7 2e-18 seq72664 93.3 7e-17 >seq309 Length=8742 Score = 141 bits (156), Expect = 2e-31 Identities = 206/282 (73%), Gaps = 7/282 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| | Sbjct 2140 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 2083 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| | Sbjct 2082 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 2023 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGCCCCGA 178 ||| | |||| | ||| |||||| | | | | ||||| |||| | | || Sbjct 2022 GAA-ATGATGATGTTGGTCCCGCACATTTGACTTGAGTTAAAATAGAGCTTTGCTCGTGA 1964 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTC-CCGCGGAAGCGC-GGGGCGCTCAGCTGGCGGAT 236 ||| | |||| ||| || |||| |||||| || |||| | || || || Sbjct 1963 ACCAAATCAGGTGGGCTTGGGCCGTCTTTGCGGAAATGCTTTGGCGGTTTGCCTACGAAT 1904 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||| | ||| || ||| | ||||||||||||||||| Sbjct 1903 TGTAATCATAATATGGGCGGGGGTGAATCCTTTGCAGACGAC 1862 >seq46002 Length=6512 Score = 98.7 bits (108), Expect = 2e-18 Identities = 85/104 (82%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79 ||||||| || ||||| |||| | |||||||| |||| || | ||||||| |||||| Sbjct 669 ATTCAGA-TATTTGGTATTTGTGCCTGTCTGATTGGGCAATGGCATGAAGCTATCATCTG 611 Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||| ||||||||||||| |||||||| ||||||| ||| |||| Sbjct 610 CTGCATTATGGCTGAACACCTCTAAGCCAGAATCTGTGCTAGAA 567 >seq72664 Length=908 Score = 93.3 bits (102), Expect = 7e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 55 GGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||| || ||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 288 GGCAATGGTGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAACCAGAATCC 347 Query 115 ATGCCAGAA 123 |||| |||| Sbjct 348 ATGCTAGAA 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818494616576