Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5859 214 1e-50 seq4769 87.8 1e-12 >seq5859 Length=97331 Score = 214 bits (236), Expect = 1e-50 Identities = 393/571 (69%), Gaps = 9/571 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| ||||| |||||||| || ||||| || ||||| | || ||| | ||| | Sbjct 75644 ATATGGCAAATGTATAAAAAGGCAGAGGCTTCGTTTTGGACCGCCGAAGAGATGGATCTT 75703 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | |||||||| | ||| | | ||| | |||| |||||||| Sbjct 75704 TCCAAGGATCTACATGACTGGCACAACCGTCTCAACGA-CAACGAACGTCATTTCATCTC 75762 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| | |||||||| || || || || || || || |||||||| | | || | Sbjct 75763 TCATGTTCTCGCGTTCTTCGCAGCGTCTGATGGGATAGTTAATGAGAACCTCCTTGAGAG 75822 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 || | | || || ||||| |||| ||||||||||||||||| ||||| ||| || Sbjct 75823 GTTTTCAAACGAAGTCCAAGTTGCGGAAGCGCGTTGTTTCTACGGTTTCCAAATTATGAT 75882 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || | ||||| |||| ||| | |||||||| || ||||||| || | Sbjct 75883 GGAAAACATTCACTCCGAGACCTACTCCCTACTCATCGACACTTACATCAAAGATGCCAC 75942 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 |||||| ||| | ||| | ||||||||||| || || | ||||| || || || Sbjct 75943 GGAACGAGAATATCTTTTCGACGCCATCGAGACCATTCCCTGTATAAAGCGAAAGGCTGA 76002 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATT 61502 |||||| | ||||| || | | | ||||| |||||||| ||| |||| || Sbjct 76003 CTGGGCCCTGCGGTGGATATCCGACAAACATTCGACATTCGGTGAACGGTTGGTGGCCTT 76062 Query 61503 TGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAA 61562 || | ||||| || | |||||| |||||| || || | ||||| ||||||||||| Sbjct 76063 CGCCGCTGTCGAAGGCATCTTTTTCTCTGGATCATTCGCGTCCATCTTCTGGTTGAAGAA 76122 Query 61563 ACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA--CGCGACGAGGGC 61620 ||||| || ||||| || ||||||| || ||| | ||||| ||||| ||||| Sbjct 76123 GCGTGGTCTCATGCCTGGCTTGACCTTTTCAAACGAGCT--TATCAGTCGCGATGAGGGT 76180 Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCA 61651 ||||| ||||| || ||||| |||| Sbjct 76181 ATGCACACAGATTTCGCGTGCTTGCTGTTCA 76211 Score = 104 bits (114), Expect = 2e-17 Identities = 275/415 (66%), Gaps = 4/415 (1%) Strand=Plus/Minus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT-TTATTGGAACGTTTCGCGCA 61271 || || || || || || || || || |||||||| || |||||| || ||| |||| Sbjct 74541 GCTTTTTTCGCGGCGTCCGATGGCATTGTCAATGAAAACCTTATTGAAAGATTTT-CGCA 74483 Query 61272 GGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGT 61331 ||| || ||||| | || || ||||| ||||| || || || | || || || | Sbjct 74482 GGAAGTTCAAGTCGCAGAAGCCCGTTGCTTCTATGGATTTCAAGTCATGATCGAAAACAT 74423 Query 61332 CCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGA 61391 || ||||| | || | | || || ||||| ||| ||| || | |||| Sbjct 74422 ACATTCGGAAACTTATTCTTTGCTTATTGATACATACGTCAAAGATCCTCATCAACGGAC 74363 Query 61392 ACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTT 61451 | | ||| | || || || || || || || |||| ||||| || ||||| | Sbjct 74362 TCACCTTTTCGAGGCAATTGAAACCATCCCTTGTGTCAAGCACAAAGCCGACTGGGCTCT 74303 Query 61452 CAATTGGATCACCAGTACAACGGCTA-CATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510 || ||||| || | ||| | | | |||| || || | | |||||||| | | Sbjct 74302 TAAATGGATTGCC-GACGAACAGTCATCTTTTGCGGAGCGCCTCATAGCATTTGCTGCAG 74244 Query 61511 TCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 | || || |||||||| ||||| || || || || ||||||||||||||||| |||| Sbjct 74243 TTGAAGGCATATTTTTCTCCGGATCATTCGCAGCTATATTTTGGTTGAAGAAACGAGGAC 74184 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 | ||||| || |||| ||| |||||| | || || || ||||||||||| Sbjct 74183 TCATGCCTGGCTTGACATTCTCTAATGAGCTTATTAGTCGTGATGAGGGCATGCA 74129 Score = 98.7 bits (108), Expect = 8e-16 Identities = 131/179 (73%), Gaps = 6/179 (3%) Strand=Plus/Minus Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 ||| || | || || ||||||||||||||||| | | | |||| || |||||||| Sbjct 73968 GACTCTCTTCCTGTGGCACTCATCGGCATGAATGCAGTATTGATGTGTCAATATATTGAG 73909 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGAT---TTGGGTATGAAGCGGATCTATAATACGAAA 61854 ||||| ||||| || || | || || |||| ||||| | | ||||||| | | | Sbjct 73908 TTTGTGGCCGATCGCCTACTTGT--ATCCCTTGGAAATGAAAAGTA-CTATAATGCAACA 73852 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 || ||||| ||||| ||||| ||||| || || | || ||||| ||||| |||||||| Sbjct 73851 AATCCATTCGATTTTATGGATATGATCTCACTTCAAGGGAAGACCAATTTCTTCGAGAA 73793 Score = 96.9 bits (106), Expect = 3e-15 Identities = 122/165 (74%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 61756 CTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG 61815 ||||| || ||||| | ||| |||| |||||||| || ||||||||||| ||||| Sbjct 76364 CTCATTGGGATGAACTCAAAACTCATGTGCCAGTATATCGAGTTTGTTGCCGATCGTCTC 76423 Query 61816 TTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGA 61874 | |||| | |||| | || || | ||| || || ||||| ||||| |||||||| Sbjct 76424 CTTGTCGCACTTGGTAACGACAAGG-TGTATGATGTGACGAACCCTTTTGACTTCATGGA 76482 Query 61875 CATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 |||||| ||||| | || ||||| || || || ||||| ||||| Sbjct 76483 CATGATCTCGCTTCAGGGGAAGACCAACTTCTTTGAGAAGCGTGT 76527 >seq4769 Length=19565 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/232 (69%), Gaps = 7/232 (3%) Strand=Plus/Minus Query 66340 CATA-AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAA 66398 |||| || || || ||||||||||| || || || ||||| | ||| || ||||| Sbjct 7026 CATACAAAAGGTCCGGTATCCAGAGTGCATAAAACAGATCTCTTGCGCGAGCTTCCTCTT 6967 Query 66399 TGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 | ||||| || || | || ||| | ||| || ||||| || || ||||||||||| | | Sbjct 6966 TTCCGTGGTTCTTCCTCAGGTCAATGAAATCGAAGATATCCGCGTGCCATGGTTCGATAT 6907 Query 66459 AGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC---GACAT 66515 | || | ||| | || |||||| || ||||| ||||| || ||||| | ||| Sbjct 6906 AAATCGTGAAAGCACCAGGTCGTTTGTTACCCCCTTGATCGACATACCGAGCAGTGGCAT 6847 Query 66516 TGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 | ||| |||| | ||| || || | || || || | ||||||||||| Sbjct 6846 CAT--AAG-CACGAAGCATGGGCACAATGCCATTCGAGTATCCATTGGTGCC 6798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397137325021760