Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20coremiiforme_20[genbank_20GCA_5F001752605.1_202016- 06-24] 190 sequences; 42,353,277 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq94 78.8 2e-12 seq8 73.4 8e-11 >seq94 Length=22548 Score = 78.8 bits (86), Expect = 2e-12 Identities = 174/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 || ||||||||||||| || | || ||| |||| |||||||| | || | || Sbjct 15048 TCGCCGTGGTTGCCCTGCTCGCCCGTGAGACCGTACAGACGCTCCTTCAGAATGTCGTCC 15107 Query 110 CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGCC 169 |||||||||| || || | ||| || || ||||| || ||||| Sbjct 15108 TTGCCGTTCCACAGCGCGAGCGAGAAACACAGTCGCTGGTGGTTGTCCGAGATACCCGCG 15167 Query 170 AGGCCGTCCTCGCCCCAACGGTAGGCGCG-GCTGCGTGCATGGTCATGGGGGAAGTAGGC 228 | |||||||||||||| ||||| ||||| | | | ||||| | ||||| || Sbjct 15168 ATACCGTCCTCGCCCCAGCGGTATGCGCGCGATTTGGACATGGAGA-ATGGGAACGAGTT 15226 Query 229 CCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAG 288 ||||||||| || | |||||| ||||| || || || || ||||| || | ||| ||| Sbjct 15227 CCAGGCGTCACCGTTGGCGCTATAGTCCTCACGGACAGTTCCCCACTGCCTCTCGGACAG 15286 Query 289 GTAGGGGCCCCACTCGC 305 || || ||||| |||| Sbjct 15287 ATAAGGTCCCCA-TCGC 15302 >seq8 Length=1730987 Score = 73.4 bits (80), Expect = 8e-11 Identities = 174/258 (67%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 || ||||| ||||||| || | || ||| ||||||||||||| | || | || Sbjct 553046 TCGCCGTGATTGCCCTGCTCGCCTGTGAGACCGTACAGGCGCTCCTTCAGAATGTCGTCC 553105 Query 110 CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGCC 169 ||||||| || || || | ||| ||| || ||||| || || || Sbjct 553106 TTGCCGTTCCAGAGCGCGAGCGAGAAACACAGACGCTGGTGGTTGTCCGAGATACCTGCG 553165 Query 170 AGGCCGTCCTCGCCCCAACGGTAGG--CGCGGCTGCGTGCATGGTCATGGGGGAAGTAGG 227 | || ||||||||||| ||||| | |||| || | ||||| | |||||| || Sbjct 553166 ATACCATCCTCGCCCCAGCGGTACGCACGCGACT-TGGACATGGGGA-AGGGGAACGAGT 553223 Query 228 CCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCA 287 ||||||||| || | || |||||||| ||||| || || ||||| || | ||| || Sbjct 553224 TCCAGGCGTCACCGTTCGCACTGTAGTCCTCGCGGACGGTTCCCCACTGCCTCTCGGACA 553283 Query 288 GGTAGGGGCCCCACTCGC 305 |||| || ||||| |||| Sbjct 553284 GGTAAGGTCCCCA-TCGC 553300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007998084800