Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 214 1e-50 seq1 187 2e-42 >seq3 Length=3676950 Score = 214 bits (236), Expect = 1e-50 Identities = 611/928 (66%), Gaps = 10/928 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||| | || || |||||||| || || | ||| || |||| | ||||| | Sbjct 2184611 GGGAGGGCGATCGAGGCAAGGTTGCACACGGCAACCTCATCGGGAGACGAGTACTCAATG 2184552 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||| || || | |||||||| | | ||| || || |||||| Sbjct 2184551 ATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCGG 2184492 Query 66122 TT-GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 || ||| || |||||||| | |||| | ||| |||||||| || | ||||| ||| Sbjct 2184491 TTCGCA-GCGTCCTTGTAGAGCATGAAGGGACCACCGGTCTCGGTCTGAGCCTCAAGGAT 2184433 Query 66181 GGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAAT 66239 |||| ||| || | ||||| | || | | | |||| || || ||||| Sbjct 2184432 GGCGAACCAGAGCTTCTGAGCCTTGATAGT-CTTGCGACCCTTGCCGGCACGCTCGTAGC 2184374 Query 66240 GTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTG 66299 ||||| || | ||||| ||| || |||| || | || |||| | | Sbjct 2184373 TCTCGTACAGCTTCTCGAACTCCTCAGAGTGGACGTCGGCGAGGCCAGGGCACTCGGCCG 2184314 Query 66300 GACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCC 66359 | ||||| || | ||| || || || || ||||| ||| || || || | |||| Sbjct 2184313 GGCACATGAGGGTCCAGTCGCCGTCGGACTCGACACGCTTCATGAAGAGGTCGGAGATCC 2184254 Query 66360 AGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGT 66419 |||||||||||||||| || || || || |||||| | ||||| || || || | || Sbjct 2184253 AGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTACGGAGGT 2184194 Query 66420 CGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATAC 66479 ||||||| || ||||||||||| ||||| || || || ||||| ||||| | ||| | Sbjct 2184193 CGAGGAAGTCGAAGATGTCGGCGTGCCAGGGCTCAAGATAGATAGCGAAGGCACCCGGGC 2184134 Query 66480 GTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTA 66539 | ||| |||||| ||||||||||| ||||| | || | || |||| | ||| || | Sbjct 2184133 GCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGCATGGGGA 2184074 Query 66540 CGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGT 66599 ||| ||||| || | ||| ||||| ||| | ||| || || || || || | || Sbjct 2184073 CGATACCGTTCGAGTAGCCGTTGGTTCCGGCAATGTACGAGCCCTTGGCACGGATGTTGT 2184014 Query 66600 GAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGT 66657 | | | ||||| ||||||||||| ||||| ||||| ||||| || | | ||| Sbjct 2184013 GGATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCACAGGTCTTGAGAGTGT 2183954 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | | |||||||| || ||||| |||| |||| | ||| |||| || | || Sbjct 2183953 C--GTAGATGCCGTCGATCGAGTCCTCCTTCATGGCGACAAGGAAGCAAGACGACATCTG 2183896 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGA 66777 || | ||| || | | |||||| ||||| | ||||| || ||||| | Sbjct 2183895 GGCGTGGGGAGTACCCGAGTTGAAGAGAGTGGGCGAGGCGTGGGTGAAGTAGCGCTCGCT 2183836 Query 66778 CATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA-GTGCAC 66836 ||| ||||| ||||| ||||| ||||||| || || || || || | | || Sbjct 2183835 CATAAGGTTGTAGGTCTCAATGACCTTCTCAATGTCGTCACCGTGGATACCAACGGAGAC 2183776 Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGG 66896 | ||||| || | || || || || || | | | | | ||| | | | ||||| Sbjct 2183775 A-CGCATGAGCATGTGCTGGGGGCGCTCAGCGATCTTGCCGTCGATGCGGAGGAGGTAGG 2183717 Query 66897 AGCGTTCCAGGGTCTTGATACCAAAGTA 66924 |||| || || ||||||| || ||||| Sbjct 2183716 AGCGCTCGAGCGTCTTGAAGCCGAAGTA 2183689 >seq1 Length=4840925 Score = 187 bits (206), Expect = 2e-42 Identities = 550/838 (66%), Gaps = 26/838 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| |||||| | ||||| |||||||| | |||||| || | | Sbjct 903036 ATCTGGCAGATGTACAAGAAGGCGCAGGCTTCGTTCTGGACCGCCGAGGAGATCAACCTC 902977 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAAC-------ATTTCAT 61199 || ||| | | |||||||| | || || ||||| | ||||| Sbjct 902976 GCCCCCGACCTCCACGACTGGGACAACAAACTGAACG----ACAACGAGCGCTACTTCAT 902921 Query 61200 TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGA 61259 | || ||| | || ||||| ||||| ||||||||||||||||| ||||| | | || Sbjct 902920 CGAGCACGTGCTCGCATTCTTCGCCGCGTCGGACGGTATCGTCAACGAGAACCTCGTCGA 902861 Query 61260 ACGTTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTG 61318 || ||| || | ||||| || | || ||||| ||||||||||||||||| Sbjct 902860 GCGCTTCT-GCGGTGAGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATCA 902802 Query 61319 CCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-- 61376 |||||||| |||||||||||| |||| | || ||||| ||||||||| | || Sbjct 902801 TGATGGAGAACATCCACTCGGAGACGTACTCGCTCCTGATCGACACGTACATCCGCGACA 902742 Query 61377 --GCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGG 61434 || || | || || ||||| | ||||||||||| || || | ||| | Sbjct 902741 ACGCCCGCCGGCAGT--AC--CTGTTCCAGGCCATCGAGACCATCCCCTGCATCAAGAAG 902686 Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACG-GCTACATTTGGTGAACGATT 61493 || || || ||||| || |||||| | | || || | | || || || || | Sbjct 902685 AAGGCCGACTGGGCTCTCCGCTGGATC-TCGGACCAGCGTTCGTCGTTCGGCGAGCGCCT 902627 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || || || | ||||||||| | || ||| ||| ||||| || | ||||| || Sbjct 902626 CATCGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCGTCCATCTTCTG 902567 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | ||||| || || || |||||||| || || ||| || ||| | || || ||||| Sbjct 902566 GCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCGAACGAGCTCATCTCGCGCGA 902507 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673 ||||||| |||| || ||||| |||| ||| |||| | || || || Sbjct 902506 CGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTC--ACGC-ACCTCCGCCGCCGCCC 902450 Query 61674 GTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCT 61733 | || | |||| | ||||| || | ||||| ||||| || || Sbjct 902449 GCACCCCGACACGATCAACAAGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGTTCCT 902390 Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793 || || || | ||||| || |||||||||||||| || |||| ||||| || Sbjct 902389 CACCGAGGCCCTCCCCGTGTCGCTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACAT 902330 Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853 || ||||| || ||||||||| | |||| | || | || | ||| || || Sbjct 902329 CGAGTTTGTCGCGGACCGTCTGCTCGTCGCCCTTGGCAACGAGAAGGTCTGGAACTCGTC 902270 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 ||||| || || |||||||| ||||| ||||| | |||||| | || || |||||| Sbjct 902269 CAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGAG 902212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567844948480