Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20faecale_20[genbank_20GCA_5F001752585.1_202016-06-24] 32 sequences; 24,653,913 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1 129 2e-24 seq5 105 3e-17 >seq1 Length=4840925 Score = 129 bits (142), Expect = 2e-24 Identities = 388/584 (66%), Gaps = 35/584 (6%) Strand=Plus/Plus Query 88671 TTCGAGTACGTCTACTTTGCCCACCCAAACTCGGTGCTCGACGGTATACCGGTCTACGGG 88730 ||||||||||||||||| |||| || ||||| | ||||||| || ||||||| | Sbjct 3115243 TTCGAGTACGTCTACTTCGCCCGTCCCGACTCGACGATCGACGGCATCTCGGTCTATCGT 3115302 Query 88731 GCGCGTCTGGAGATGGGCAGGTTGTTGGCTGCCCGCATCAGGCATGTGCTGAGTGC--CG 88788 || ||| ||| ||||| || | || | || || || |||| || || Sbjct 3115303 GCCCGTATGGCCATGGGAGAGTATCTCGCCGAGGAGGCCAAGCGTGCGCTGGACGCTGCG 3115362 Query 88789 AGCAACT-GGCCGAGGTGCAGTGCGTGATCGCCGTGCCGGAGACGGCGCGGATCGCGGCG 88847 | || | || ||| || ||| ||| |||| ||||| ||| |||| | |||||| Sbjct 3115363 AACATCAAGGTCGACGT------CGTCATCCCCGTCCCGGATACGTCGCGTGTGGCGGCG 3115416 Query 88848 GGCCAAGTGGCCTACGAGCTCGGCCTGCCTCTGCGCGAGGGCCTGCTCAGGAACCGGTAC 88907 || | || | | |||||| | || || |||||| | ||| |||||| ||| Sbjct 3115417 CTGCAGCTCGCGCAGCACCTCGGCATCCCGTACCGTGAGGGCTTCGTCAAGAACCGCTAC 3115476 Query 88908 CAGACAAGCACTCTGGCCAGGACCTTCATCATGGCCGATGCCGAGA-GCCGCGGACG--G 88964 || |||| | |||||||||||| ||| ||| ||| || ||| | | | Sbjct 3115477 G----------TC-GGCC-GCACCTTCATCATGCCCG--GCC-AGACGCAGCGCAGGAAG 3115521 Query 88965 GCCGTGGCGC-GCAAGTTCACCGCCGTGGGCCGA--GAGTGCAGGGACAAGGCCGTGGTC 89021 |||| ||| | ||| | | ||| || |||| |||| | ||||||| | ||| | Sbjct 3115522 AACGTG-CGCAGGAAGCTGAACGCGATG--CCGATGGAGTTCGCGGACAAGACGGTGCTT 3115578 Query 89022 GTGGTGGACGACTCTGTCGTGCGCGGCACCACATCCAAGTTCATAATCGACCTC-CTTCG 89080 | || |||||||| ||||||||||||| || |||||| || | | | | | Sbjct 3115579 CTTGTCGACGACTCGATCGTGCGCGGCACGACGTCCAAGGAGATCGTGCAGATGGCCAAG 3115638 Query 89081 CAAGTCTGGCGCCACCAAGGTCTACCTCGCTTCTTGCTCTCCCCCGATCCGTTACCCCAA 89140 | || ||| |||| |||||| | |||| || ||| | ||||| || || ||| | || Sbjct 3115639 GACGT-TGGTGCCAAGAAGGTCATCTTCGCCTCGTGCGCGCCCCCCATTCGCTACTCGAA 3115697 Query 89141 CGTGTACGGCATCGACATACCGTCGGCCAAGGAGCTCATTGCTTCTGGTCGCACCGAGCA 89200 |||||||||||||||||| |||||| | ||||||| | || | || |||||| | Sbjct 3115698 CGTGTACGGCATCGACATGCCGTCGCCGCAGGAGCTGGTCGCGTACGGCCGCACCCCCGA 3115757 Query 89201 CGAGGTGGCTCTCCTCCTCGGAGCCGACCAGGTCATCTATCAGA 89244 ||||| || | |||| ||||||| |||||||| |||| Sbjct 3115758 GGAGGTCGCGCAGACGATCGGCGCCGACCTCGTCATCTACCAGA 3115801 >seq5 Length=1946847 Score = 105 bits (116), Expect = 3e-17 Identities = 131/177 (74%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGG-CGTCTCGCCGGCCGC 449064 ||||||||||||||| | | ||||||||||||||||||||||| | | || | | Sbjct 1499960 GTCATGCGCGACGGGAATCCGTGCGGGTTCATGATGATGTCGGGGCAGATACCCTGGT-C 1500018 Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG 449124 |||||| |||||||||| | || | |||||| |||||||||||||||||||| Sbjct 1500019 GTTGAACGGCATGTCCTGCTGCGGCACGATGAGGCCGCACACGCCCTTCTGGCCGTGGCG 1500078 Query 449125 GCTGCAGAACTTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACGATCTTGAT 449181 | |||||||||| || |||| || ||| || |||| || ||||||||| Sbjct 1500079 GGACGAGAACTTGTCGCCGAGCTCTGGGCGGCGCGTCTGGCGCGTCAGGATCTTGAT 1500135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738324409536