Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 277 1e-69 seq7 199 3e-46 >seq2 Length=2999908 Score = 277 bits (306), Expect = 1e-69 Identities = 623/927 (67%), Gaps = 8/927 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 ||||| || | || || ||||||||||| || | ||||||||| | | ||||| | Sbjct 498300 GGAAGAGCGATCGAGGCAAGGTTGCAGACGGCGACCTCGTCAGGCGAAGAGTACTCAATG 498241 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||| || || | |||||||| | | ||| || || |||||| Sbjct 498240 ATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTGCGG 498181 Query 66122 TT-GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 || ||| || |||||||| | |||| | || |||||||| |||| || | ||| Sbjct 498180 TTTGCA-GCGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCGGTCTGGGCTTCGAGGAT 498122 Query 66181 GGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAAT 66239 |||| ||| || | ||||| | || | | | |||| || || ||||| Sbjct 498121 GGCGAACCACAGCTTCTGGGCCTTGATGGT-CTTGCGACCCTTGCCGGCACGCTCGTAGC 498063 Query 66240 GTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTG 66299 ||||| || | ||||| || || || || || | || |||| | Sbjct 498062 TCTCGTACAGCTTCTCGAACTCCTCGGAGTGAACGTCCGAGAGGCCGGGGCACTCAGCGG 498003 Query 66300 GACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCC 66359 | ||||| || | ||| ||||| || || ||||| ||| || || || | |||| Sbjct 498002 GGCACATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATGAAGAGGTCGGAGATCC 497943 Query 66360 AGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGT 66419 |||| ||||||||||| || || || || |||||| | ||||| || ||||| | || Sbjct 497942 AGAGAGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCGTGGTTCTTGCGGAGGT 497883 Query 66420 CGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATAC 66479 ||||||| || ||||||||||||||||| || || |||||||||||||| | || | Sbjct 497882 CGAGGAAGTCGAAGATGTCGGCATGCCAGGGCTCAAGGTAGATGGCGAAGGCACCAGGGC 497823 Query 66480 GTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTA 66539 | ||| |||||| ||||||||||| ||||| | || | || |||| | ||| || | Sbjct 497822 GCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTAGCGTCGTAGGCACGGAGCATAGGAA 497763 Query 66540 CGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGT 66599 ||| ||||| || | ||| |||||||| | ||| || || || || || | || Sbjct 497762 CGATACCGTTCGAGTAGCCGTTGGTGCCAGCAATGTACGAGCCCTTGGCGCGGATGTTGT 497703 Query 66600 GAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGT 66657 | | | ||||| || |||||||||||||| ||||| || || || | ||| Sbjct 497702 GGATGTGGAGACCGATGCCACCGGCCGTCTTGGAGATCTGCGCGCAGGTCTTGAGGGTGT 497643 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | | || ||||| |||||||| |||| |||| | |||| |||| || | || Sbjct 497642 C--GTAGATACCGTCGATGGAGTCCTCCTTCATGGCGACGAGGAAGCAAGACGACATCTG 497585 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGA 66777 || | || ||| | | |||||| || |||| |||||||| |||||| | || Sbjct 497584 GGCGTGAGGAGTGCCCGAGTTGAAGAGCGTCGGTGAGGCGTGCGTGAAGTAACGCTCCGA 497525 Query 66778 CATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACA 66837 |||| ||||||||||||||||| || ||||| ||||| ||||| |||| | | Sbjct 497524 CATGAGGTTGTACGTCTCGATGACCTTCTCGATGTTGTCGCCGTGAATACCGACGGAAAC 497465 Query 66838 TCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGA 66897 |||||||| | || || || || ||| | | | | | ||| | | | |||||| Sbjct 497464 ACGCATCAGCATGTGCTGGGGGCGCTCGGCGATCTTGCCGTCGATGCGGAGGAGGTAGGA 497405 Query 66898 GCGTTCCAGGGTCTTGATACCAAAGTA 66924 ||| || |||||||||| ||| ||||| Sbjct 497404 GCGCTCGAGGGTCTTGAAACCGAAGTA 497378 >seq7 Length=1807069 Score = 199 bits (220), Expect = 3e-46 Identities = 557/844 (66%), Gaps = 22/844 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| ||||| | || || |||||||| | |||||| || | | Sbjct 103445 ATTTGGCAGATGTACAAGAAGGCCCAGGCGTCGTTCTGGACCGCCGAGGAGATCAACCTC 103504 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGG--TGA--ACAA---CAT-TTCA 61198 || ||| | | |||||||| | | ||| | ||| || | | | |||| Sbjct 103505 GCCCCCGACCTCCACGACTGGGAC-----AACAAGCTGAATGACAACGAGCGCTTCTTCA 103559 Query 61199 TTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGG 61258 | | || || | |||||||| ||||| |||||||| |||||||| ||||| | | | Sbjct 103560 TCGAGCACGTCCTCGCGTTCTTCGCCGCGTCGGACGGCATCGTCAACGAGAACCTCGTCG 103619 Query 61259 AACGTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATT 61317 | || ||| |||| | |||| || | || ||||| ||||||||||||||||| Sbjct 103620 AGCGCTTCTGCGCCG-AGGTCCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATC 103678 Query 61318 GCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAG 61377 |||||||| |||||||||||| |||| | |||||||| ||||||||| | || Sbjct 103679 ATGATGGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGAC 103738 Query 61378 CGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA 61437 ||| || | ||||| | |||||||| || || || | ||| ||| Sbjct 103739 AACGCGCGCCGCCAGTTCCTGTTCCAGGCCATCGACACCATCCCCTGCATCAAGAAGAAG 103798 Query 61438 GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT--ACATTTGGTGAACGATTGC 61495 || || |||||| | |||||| || |||| ||| | || || || || || Sbjct 103799 GCCGACTGGGCCCTGCGCTGGATCTCC--GACAAGCGCTCCTCGTTCGGAGAGCGTCTGA 103856 Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555 | || || || | |||||||| | || ||| || ||||| || | ||||| ||| Sbjct 103857 TCGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCTTCTGGC 103916 Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615 | ||||| || || || |||||||| || || ||| ||| ||| | || || || |||| Sbjct 103917 TCAAGAAGCGCGGCCTCATGCCCGGCCTCACGTTCTCCAACGAGCTCATCTCTCGTGACG 103976 Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675 |||| | || || || || | || |||| | | || | | ||||| Sbjct 103977 AGGGTCTCCACACCGACTTCGCGTGCCTCCTCTTCACCCAC-CTCCGCCG--CCGTCCTC 104033 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 ||| | |||| | ||||| || | ||||| ||||| || |||| Sbjct 104034 ACCCGGACACGATCAACAAGATCATCAAGGAGGCCGTCAAGATCGAGCAGGAGTTCCTGA 104093 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 | || || |||||||||| |||||||||||||| || |||| ||||| || | Sbjct 104094 CCGAGGCCCTGCCCGTCTCGCTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCG 104153 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | ||||| |||||||| ||| | |||| | |||| | | ||| || || | Sbjct 104154 AGTTTGTCGCCGACCGCCTGCTCGTCGCCCTCGGTAACGACAAGGTCTGGAACTCGGCCA 104213 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 |||| || ||||||||||| ||||| |||||| | |||||| | || || |||||| | Sbjct 104214 ACCCCTTCGATTTCATGGAGATGATCTCGCTGCAGGGCAAGGCCAACTTCTTCGAGTCGC 104273 Query 61916 GTGT 61919 |||| Sbjct 104274 GTGT 104277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567912783520