Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20inkin_20[genbank_20GCA_5F001752625.1_202016-06-24] 18 sequences; 20,339,538 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq7 104 1e-16 seq2 96.9 1e-14 >seq7 Length=1807069 Score = 104 bits (114), Expect = 1e-16 Identities = 345/531 (65%), Gaps = 33/531 (6%) Strand=Plus/Plus Query 448666 CTCCATGTCGCCCAATCGGAGCCCGCCGTG-TCGCAACTTGCCCTCGGTGGGCTGCCGCG 448724 |||||| || |||| || || ||||||| | | ||| |||||||| ||||| |||| Sbjct 1326495 CTCCATCTCTCCCAGACGCAGACCGCCGTCCTTGGAACGA-CCCTCGGTCGGCTGGCGCG 1326553 Query 448725 TGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGCATCTTCTCCGAGGCCAGTTGCTTGA 448784 ||||| || || ||| || | |||| ||||||||| ||| | ||| ||||||| Sbjct 1326554 TGAGGTTCGCCCTGGGACCCGTCGGGCGCGCGTGCATCTTGTCCATGACCATGTGCTTGA 1326613 Query 448785 GGCTCTGGAAGAAGAAGGGCGCGTAGAACATG--CGGCACGGCATCATCTCGCCCGTCTG 448842 | ||||| || ||| || || || | | | || | || | | ||||||||| Sbjct 1326614 GTTTCTGGTAGTAGATCGGGCCGAAGTAGACGTACGTCTCG--AGCGACTCGCCCGTGAT 1326671 Query 448843 GCCGTCCGTAAAGATCGTCTTGCCCTCG-----------GGC-TCGATCATGCCCCTCTC 448890 |||| ||| | || |||||| || ||| ||||| | | ||| Sbjct 1326672 GCCGCTCGTCAGCATGTCCTTGCCGGCGTACGAGAAGCCGGCGTCGATGAGGA---TCTG 1326728 Query 448891 CTCCATGTAGTCCATGAGCTCGGCCACGGAGAGGTCCGAAAAGGCCGTGCCGTCCTGCGG 448950 ||||| | | | || || | || ||||| |||||||||| |||| | Sbjct 1326729 GCTCATGTCGACAAC---CTTGGACCCG-------CCGAAC--GCCGTGCCGTACTGCAG 1326776 Query 448951 CAAGCCGCTCTCACAGCCCGTGATGGCCTGGAGGGCCTCGAGCAACATGGCGTAGGTCAT 449010 | |||| | ||||| || || || ||||| || | || || ||||| Sbjct 1326777 CTTGCCGGCCATGAGGCCCGCCTTGCCCGACAGCAGCTCGATCATCTTGCCGACCGTCAT 1326836 Query 449011 GCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCGTTGAA 449070 ||| |||||| | | ||||||||||||||||||||||| ||| ||||||| Sbjct 1326837 GCGTGACGGGAAACCGTGCGGGTTCATGATGATGTCGGGGCAGATGCCCTGATCGTTGAA 1326896 Query 449071 GGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGGCTGCA 449130 |||||||||| | || | ||||||| |||||||||||||||||||| | Sbjct 1326897 TGGCATGTCCTGCTGCGGCACAATCAGGCCGCACACGCCCTTCTGGCCGTGGCGCGACGA 1326956 Query 449131 GAACTTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCGCAGCACGATCTTGAT 449181 ||||||||| || |||| ||| || || ||| || ||||||||| Sbjct 1326957 GAACTTGTCGCCGAGCTCCGGCCGACGCGTCTGCCGCGTCAGGATCTTGAT 1327007 >seq2 Length=2999908 Score = 96.9 bits (106), Expect = 1e-14 Identities = 169/242 (70%), Gaps = 8/242 (3%) Strand=Plus/Plus Query 89007 GACAAGGCCGTGGTCGTGGTGGACGACTCTGTCGTGCGCGGCACCACATCCAAGTTCATA 89066 |||||| | ||| || | || |||||||| ||||||||||||| || |||| || Sbjct 1323594 GACAAGACGGTGCTCCTCGTTGACGACTCCATCGTGCGCGGCACGACGAGCAAGGAGATC 1323653 Query 89067 ATCGACCTC-CTTCGCAAGTCTGGCGCCACCAAGGTCTACCTCGCTTCTTGCTCTCCCCC 89125 || | | | | | || |||||| | ||||| | ||||||| || | || || Sbjct 1323654 GTCCAGATGGCCAAGGACGT-TGGCGCGAGGAAGGTTGTCTTCGCTTCGTGTGCCCCACC 1323712 Query 89126 GATCCGTTACCCCAACGTGTACGGCATCGACATACCGTCGGCCAAGGAGCTCATTGCTTC 89185 ||| | ||| | |||||||||||||||||||| |||||| | |||||||| |||| | Sbjct 1323713 CATCAGGTACTCGAACGTGTACGGCATCGACATGCCGTCGCCGCAGGAGCTCGTTGCCTA 1323772 Query 89186 TGGTCGCA---CCGAGCACGAGGTGGCTCTCCTCCTCGGAGCCGACCAGGTCATCTATCA 89242 || |||| ||||| ||||| || | |||| ||||||| || ||||| || Sbjct 1323773 CGGCCGCACGCCCGAG---GAGGTCGCGCAGACGATCGGCGCCGACCTCGTGATCTACCA 1323829 Query 89243 GA 89244 || Sbjct 1323830 GA 1323831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738707480364