Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq87 260 4e-67 >seq87 Length=7071 Score = 260 bits (288), Expect = 4e-67 Identities = 358/498 (72%), Gaps = 33/498 (7%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 3839 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 3898 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | || | Sbjct 3899 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA-----TTAAATT 3946 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 | | ||| || | ||||| | ||||||| ||||||||||||||| Sbjct 3947 AAAAAATTT---ATT-----TTAATTTAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 3998 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA---- 242 | |||| ||||| |||||| ||| |||||||||||||| || |||||||| | Sbjct 3999 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTATTAGTTGCTAATTT 4058 Query 243 ---TCATTA-AGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 | |||| | ||||||||| | || | ||| | | |||||||| ||| Sbjct 4059 ATTTTATTATATAAAAGCACTCTAATAAAAATGTCAATGATAGGTTGAAGGAAGGTAGGG 4118 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| ||||||||| |||||||||||||||||||||||| | | Sbjct 4119 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAATGATAATT 4178 Query 359 ACAAAGGGCAGCGAAACCG----CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 |||| | | || | | | | | ||||||| | |||| | ||| ||||| Sbjct 4179 ACAATGAGAGGCAATAATGATTAAAAATTGGAGCAAAT-CTTTAAAAATTATCTTAGTTC 4237 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||| | | ||| |||||| | ||||||||||||||||||||||||||| ||| ||||| Sbjct 4238 GGATTATGGGCTGAAACTCGCCCATATGAAGCTGGAATCGCTAGTAATCGCAGAACAGCA 4297 Query 475 TGCTACGGTGAATACGTT 492 |||| ||||||||| ||| Sbjct 4298 TGCTGCGGTGAATATGTT 4315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503998255360