Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24]
116 sequences; 40,322,879 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq91 131 6e-28
>seq91
Length=5804
Score = 131 bits (144), Expect = 6e-28
Identities = 181/252 (72%), Gaps = 1/252 (0%)
Strand=Plus/Plus
Query 56 ATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTAC 115
||||||||||| || ||| ||||| || | ||||||||| || ||||||||||
Sbjct 5500 ATTCGGAGTTTCCAAGAGTTCAGTAAGTTTTTACGCCCCCTAGCTCAATGAGTGCTCTAC 5559
Query 116 CTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCAC 175
| || || | | | ||| || | ||| |||||| ||| ||||||||||| |
Sbjct 5560 C-CCAAAAAAAGATTTTAAATGCTCTACTTCAATAGATTTCGCGGAAAACCAGCTATCTC 5618
Query 176 GAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGT 235
||||||||| ||||||||| |||| ||||| ||||| || | ||| | || || ||
Sbjct 5619 CGAGTTTGATTAGCCTTTCACTCCTAACCACAAATCATCTCCATATTTTGCCACATATGT 5678
Query 236 GGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTC 295
| ||||| ||||||| || ||||| ||||| ||| ||||| |||||||||
Sbjct 5679 GAGTTCGATCCTCCAAATAGTTTTACCTATTTTTCAATCTGTTCATGGTTAGATCACTCG 5738
Query 296 GCTTCGGGTCTT 307
| ||||||||||
Sbjct 5739 GTTTCGGGTCTT 5750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817597891584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |