Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24]
116 sequences; 40,322,879 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq87 165 2e-38
>seq87
Length=7071
Score = 165 bits (182), Expect = 2e-38
Identities = 245/341 (72%), Gaps = 6/341 (2%)
Strand=Plus/Plus
Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGG 58
||||| | | |||| |||||||| ||| ||||||||||||||||||||||| ||
Sbjct 3434 TACTTAAAAAAGAAGTTCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGA 3492
Query 59 GCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAG 118
|| ||| |||| |||||| | | |||||||||||| ||||||||||| |||||| |
Sbjct 3493 GCGAGCATTATTCGGAATGATTAGGCGTAAAGGGTTTGTAGGTGGTTTTTTAAGTTGAAA 3552
Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGG- 177
| | || ||||||| | | ||| |||||| | || |||| |
Sbjct 3553 AAAACAAATTAAAGCTCAACTTTATAAATTTTTTCAAAACTGAAAAACTTGAGTATAAAT 3612
Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237
|| || | ||||||| ||| || || | | |||| || |||| ||| ||||| | ||
Sbjct 3613 AGAGGATAATGGAATTTCTATTGGAGGGATAAAATATGTTGATAATAGAAGGAAGATCAA 3672
Query 238 TGGCGAAGGCGGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296
|||||||| | |||| | || |||||||||||| ||||||| |||| ||| |
Sbjct 3673 AAGCGAAGGCAATTATCTGGG-TATATACTGACACTGAGAAACGAAAGCTTGGGTAGCGA 3731
Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337
|| |||||||| |||| ||||||||| || |||||||||||
Sbjct 3732 ACGGGATTAGAGACCCCGGTAGTCCATGCTGTAAACGATGA 3772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203198604288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |