Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 2e-13 seq18 87.8 7e-12 >seq2 Length=3385878 Score = 93.3 bits (102), Expect = 2e-13 Identities = 168/242 (69%), Gaps = 8/242 (3%) Strand=Plus/Plus Query 89007 GACAAGGCCGTGGTCGTGGTGGACGACTCTGTCGTGCGCGGCACCACATCCAAGTTCATA 89066 |||||| | ||| || | || |||||||| | ||||||||||| || |||| || Sbjct 2232257 GACAAGACGGTGCTCCTCGTTGACGACTCCATTGTGCGCGGCACGACGAGCAAGGAGATC 2232316 Query 89067 ATCGACCTC-CTTCGCAAGTCTGGCGCCACCAAGGTCTACCTCGCTTCTTGCTCTCCCCC 89125 || | | | | | || |||||| | |||||| |||| |||||| | || || Sbjct 2232317 GTCCAAATGGCCAAGGACGT-TGGCGCGAAGAAGGTCGTTTTCGCGTCTTGCGCCCCGCC 2232375 Query 89126 GATCCGTTACCCCAACGTGTACGGCATCGACATACCGTCGGCCAAGGAGCTCATTGCTTC 89185 ||| | ||| | |||||||||||||||||||| |||||| | |||||||| | || | Sbjct 2232376 CATCAGGTACTCGAACGTGTACGGCATCGACATGCCGTCGCCGCAGGAGCTCGTCGCCTA 2232435 Query 89186 TGGTCGCA---CCGAGCACGAGGTGGCTCTCCTCCTCGGAGCCGACCAGGTCATCTATCA 89242 || |||| ||||| ||||| || | |||| ||||||| || ||||| || Sbjct 2232436 CGGCCGCACGCCCGAG---GAGGTTGCGCAGACGATCGGCGCCGACCTCGTGATCTACCA 2232492 Query 89243 GA 89244 || Sbjct 2232493 GA 2232494 >seq18 Length=214074 Score = 87.8 bits (96), Expect = 7e-12 Identities = 186/270 (69%), Gaps = 6/270 (2%) Strand=Plus/Minus Query 448931 AAGGCCGTGCCGTCCTGCGGCA-AGCCGCTCTCACAGCCCGTGATGGCCTGGAGGGCCTC 448989 ||||| || |||| |||| || | |||| ||| ||||| | || ||| ||| Sbjct 6425 AAGGCTGTACCGTACTGCAGCTTACCCGCCATCAG-GCCCGCTTTACCCGAGAGCAGCTC 6367 Query 448990 GAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC-GG 449048 || || | || || ||||| ||||||||| | | || ||||||||||||||||| || Sbjct 6366 GATCATCTTGCCGACCGTCATACGCGACGGGAAACCGTGGGGGTTCATGATGATGTCGGG 6307 Query 449049 GCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGC 449108 || | || | ||||||| |||||||||| | || | ||| || || | Sbjct 6306 GCAGATACCCTG-GTCGTTGAACGGCATGTCCTGCTGCGGCACGATCAGACCACACACTC 6248 Query 449109 CCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCTCGGGCTTGCGTGTGAAGCGCA 449168 ||||||| |||||||| | |||||||||| || ||||||| || || |||| Sbjct 6247 CCTTCTGTCCGTGGCGCGAGGAGAACTTGTCACCGAGCTCGGGGCGACGCGTCTGGCGCG 6188 Query 449169 GCACGATCTTGATGGAGC-GGAAGCCGTCC 449197 || ||||||||| ||| || ||||||| Sbjct 6187 TCAGGATCTTGAT-CAGCTGGTTGCCGTCC 6159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084736025984568