Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20ovoides_20[genbank_20GCA_5F001752645.1_202016-06-24] 116 sequences; 40,322,879 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1 100 1e-15 seq4 93.3 2e-13 >seq1 Length=3718887 Score = 100 bits (110), Expect = 1e-15 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 ||||| |||||||| || ||||||| | | ||||||||||||||||||||| ||||| Sbjct 1556999 CCAATGGTCATACGGGATGGAATGGCGTGCGGGTTGATGATGATGTCAGGCGTGATGCCT 1557058 Query 364484 TCAGCGGTAAAGGGCATATCTTC-GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 || || || |||||||| || || | || | | ||| ||| || || ||||| || | Sbjct 1557059 TCGGCCGTGAAGGGCATGTCCTCTTGCCGGTATG-TGATACCGATCGTACCCTTCTGTCC 1557117 Query 364543 ATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || |||||||||||||| || Sbjct 1557118 GTGACGCGACGCAAACTTGTCGCCGAT 1557144 >seq4 Length=3236612 Score = 93.3 bits (102), Expect = 2e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 || || ||||||||||| ||||||| | | ||||||||||||||||| || ||||| Sbjct 1857385 CCGATTGTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTCGGGAGTGATGCCC 1857326 Query 364484 TCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 ||||| || || ||||| || || | || | ||| ||| || || ||||| || | Sbjct 1857325 TCAGCCGTGAACGGCATGTCCTCCTGGCGATAGGTGATACCGATCGTACCCTTCTGTCCG 1857266 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | || || || |||||||| ||||| Sbjct 1857265 TGACGCGAGGCGAACTTGTCACCAAT 1857240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884883598587588